RetrogeneDB ID: | retro_sara_270 | ||
Retrocopylocation | Organism: | Shrew (Sorex araneus) | |
Coordinates: | scaffold_139984:196..494(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | TIMM17A | ||
Ensembl ID: | ENSSARG00000008807 | ||
Aliases: | None | ||
Description: | translocase of inner mitochondrial membrane 17 homolog A (yeast) [Source:HGNC Symbol;Acc:17315] |
Percent Identity: | 64.49 % |
Parental protein coverage: | 59.65 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 5 |
Parental | GGLFSMIDCSLVQVRGKEDPWNSITSGALTGAIL-AARNG-PVAMVGSAAMGGILLALIEGAGI-LLTRF |
G.LFSMID.S.V.VRGKE..WN...SGA.TG....AARN..P..MVGS.AMG.ILLALIE..GI.LLTRF | |
Retrocopy | GCLFSMIDFSRV*VRGKEGLWNALISGAFTGTNR<AARNA<PMTMVGSTAMGAILLALIETTGI<LLTRF |
Parental | ASA-QFPNGPQFAEDP-SQLPSTQLPPSPFGDYRQYQ |
ASA..FP.G.QFA.DP...LPST.L..SPF..Y.Q.Q | |
Retrocopy | ASA<SFPLG-QFAGDP<VYLPSTLLSLSPFRAYQQHQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |