RetrogeneDB ID: | retro_etel_174 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_2993:4656..4887(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | UBA52 | ||
Ensembl ID: | ENSETEG00000003392 | ||
Aliases: | None | ||
Description: | ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:12458] |
Percent Identity: | 87.01 % |
Parental protein coverage: | 60.16 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV |
MQIFVKT.TGKTITLEVEP..TIEN..AKIQDKEGIPPDQQRLIFAGKQLEDGRT.S.YNIQKESTLHLV | |
Retrocopy | MQIFVKTVTGKTITLEVEPRATIENIRAKIQDKEGIPPDQQRLIFAGKQLEDGRTQSNYNIQKESTLHLV |
Parental | LRLRGGI |
.RLRG.. | |
Retrocopy | PRLRGRV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |