RetrogeneDB ID: | retro_etel_1785 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_296378:5861..6085(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | UBA52 | ||
Ensembl ID: | ENSETEG00000003392 | ||
Aliases: | None | ||
Description: | ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:12458] |
Percent Identity: | 77.63 % |
Parental protein coverage: | 58.59 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR-LIFAGKQLEDGRTLSDYNIQKESTLHL |
.Q.F.KTL.GKTI.LEV.PSDTIE.VKAKIQDKEGIPPDQQR..IFAG.QLEDG.TLS...IQ.ESTL.L | |
Retrocopy | LQSFMKTLRGKTIPLEVQPSDTIEKVKAKIQDKEGIPPDQQR<VIFAGRQLEDGPTLSEFSIQTESTLRL |
Parental | VLRLRG |
VLRL.G | |
Retrocopy | VLRL*G |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |