RetrogeneDB ID: | retro_itri_284 | ||
Retrocopylocation | Organism: | Squirrel (Ictidomys tridecemlineatus) | |
Coordinates: | JH393282.1:6055698..6056035(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSSTOG00000026544 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 66.39 % |
Parental protein coverage: | 82.39 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | ALSGVCHKSTFSSLPDDYNCKVELALTSDGRTIVC-YHPSVDIPYEHTQPIPQPDPLHNNEETHDQVLKT |
ALSGVCHK..FSSLP.D..CK..L.LTSDGR.IVC...P..DIP.EHTQP.PQPDP.HN.EET.DQ.LKT | |
Retrocopy | ALSGVCHKPAFSSLPGDSHCKGDLTLTSDGRIIVC<LPPFADIPHEHTQPTPQPDPVHNSEETQDQGLKT |
Parental | RLEEKDE-HLEEGPMIEKLSKMFFTTKHRWYPHGQYHRRRKNPNPPKDR |
RLEEKDE..LE.GP.I..L......TKHRWYPHG.YHR..KN.N....R | |
Retrocopy | RLEEKDE<NLEQGPVIGEL----LSTKHRWYPHGHYHRCHKNLNLQRHR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |