RetrogeneDB ID: | retro_itri_899 | ||
Retrocopylocation | Organism: | Squirrel (Ictidomys tridecemlineatus) | |
Coordinates: | JH393340.1:1342379..1342658(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSSTOG00000026544 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 77.42 % |
Parental protein coverage: | 65.49 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | IAFKWVMSKRILWKHLFPVQNSALSGVCHKSTFSSLPDDYNCKVELALTSDGRTIVCYHPSVDIPYEHTQ |
IA.KWV.SKR.L.K.LFP.QN.ALSG.CHKSTFSSLPD..NCK.ELALTSDGRTIVCYHPS.DIPYEHTQ | |
Retrocopy | IALKWVISKRTLLKYLFPGQNGALSGMCHKSTFSSLPDNSNCKIELALTSDGRTIVCYHPSIDIPYEHTQ |
Parental | PIPQPDPLHNNEETHDQVLKTRL |
PIP..DP.HN..ETHDQ..K..L | |
Retrocopy | PIPLLDPVHNDGETHDQD*KKKL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |