RetrogeneDB ID: | retro_meug_494 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold124223:4231..5096(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSMEUG00000005942 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 76.47 % |
Parental protein coverage: | 66.36 % |
Number of stop codons detected: | 4 |
Number of frameshifts detected | 1 |
Parental | MSIYKIQAREIFDSRGNPTVEVDLYTEKGQFRAAVPSGASTGIHEALELRDNDKTRYMGKGVSKAVEHIN |
.SIYKIQAREIFDS.GNP.VEVDLY..K..F.AA..SGAST.IHEAL.L..NDKTRYMGKG.SKA.EHIN | |
Retrocopy | ISIYKIQAREIFDSPGNPIVEVDLYPGKDLF*AAMCSGASTSIHEALQL*HNDKTRYMGKGFSKAGEHIN |
Parental | KTIAPTLIS-KKLNVVEQEKIDKLMIEMDGTENKSKFGANAILGVSLAVCKAGAAEKGVSLYRHIADLAG |
KTI...LI..KKLNVV.QEKI.KLM.EM..TENKSKFG.NAILG.SL.VCK..AAEK.VSLY.HIAD..G | |
Retrocopy | KTISSSLIN>KKLNVVKQEKINKLMTEMESTENKSKFGENAILGMSLTVCKTRAAEKDVSLYHHIADFIG |
Parental | NDEVILPVPAFNVINGGSHAGNKLAMQEFMILPVGAANFKEAMRIGAEVYHNLKSVIKQKYGQDATNVGD |
.D.VILPVP.F..I.GGSHAGNKLA..EFMIL..G...FKE.M.I..EVYH.LKSVIK.KYG.DATN.GD | |
Retrocopy | SDGVILPVPDFHMISGGSHAGNKLATWEFMILSGGVVTFKEEMSIEVEVYHTLKSVIKWKYG*DATNLGD |
Parental | EGGFAPNILENKEALDLLKDAIGKAGYTDKVVIGMDVAASEFFRSGKYDLDFKSPDDSSRYISPSELGDL |
EGGFAPNI..NKEALDLL...IGKAGY.DKV.IGMDVAASEFF.SGKY.LDFKSPDDS.RYISP.ELGDL | |
Retrocopy | EGGFAPNIPKNKEALDLLNNTIGKAGYIDKVIIGMDVAASEFF*SGKYVLDFKSPDDSNRYISPFELGDL |
Parental | YKSFIKDYP |
YKSFI.DYP | |
Retrocopy | YKSFIEDYP |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |