RetrogeneDB ID: | retro_mluc_1357 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429827:1734224..1734744(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL15 | ||
Ensembl ID: | ENSMLUG00000013809 | ||
Aliases: | None | ||
Description: | Ribosomal protein L15 [Source:UniProtKB/TrEMBL;Acc:G1PNN2] |
Percent Identity: | 75.56 % |
Parental protein coverage: | 85.78 % |
Number of stop codons detected: | 4 |
Number of frameshifts detected | 5 |
Parental | MGAYKYIQELWRKKQSDVMRFLLR-VRCWQYRQLSALHRAP-RPTRPDKARRLGYKAKQGYVIYRIRVRR |
MGAYKYIQELWRKKQSDVMRFLLR.V.C.QY.QLS.LHR.P.RPT.P.K..RLGYKA.QGY..Y.I.VR. | |
Retrocopy | MGAYKYIQELWRKKQSDVMRFLLR<VHC*QYCQLSVLHRTP<RPTQPEKVCRLGYKAQQGYITYQIHVRC |
Parental | GGRKR-PVPKGATYGKPVHH-GVNQLKFARSLQSVAEERAGRHCGALRVLNSY-WVGEDSTYKFFEVILI |
GG.K...VPK.ATY.K.VH...VNQLKFA.SL..VA.E.AGRHCGALRV.NSY.WVGED.TYKFFEVILI | |
Retrocopy | GGCKA<SVPKCATYSKSVHV<SVNQLKFAQSL*CVAKE*AGRHCGALRVRNSY<WVGEDATYKFFEVILI |
Parental | DPFHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLG |
DPFH.A.RRNPDTQWIT.PVHKHREM.GLTSAGR.....G | |
Retrocopy | DPFHNAMRRNPDTQWITTPVHKHREM*GLTSAGRLEKASG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |