RetrogeneDB ID: | retro_mluc_749 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429774:10199208..10199815(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSMLUG00000012112 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL15 | ||
Ensembl ID: | ENSMLUG00000013809 | ||
Aliases: | None | ||
Description: | Ribosomal protein L15 [Source:UniProtKB/TrEMBL;Acc:G1PNN2] |
Percent Identity: | 87.02 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 4 |
Parental | MGAYKYIQELWRKKQ-SDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKAR-RLGYKAKQGYVIYRIRVRR |
MGAY.YIQE..RKK..SDV.RFLL.VRCWQYRQLSALH.AP.P...DKAR..LGYKAKQG.VIYRIRVRR | |
Retrocopy | MGAYRYIQEPGRKKH<SDVLRFLLWVRCWQYRQLSALHGAP-PHPADKAR<QLGYKAKQG*VIYRIRVRR |
Parental | GGRKR-PVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDP |
GGRK...VPKGATYG.PVHHGVNQL.FARSLQSV..ERAGRHCGALR.LNSYWVGEDSTY.FFEVILIDP | |
Retrocopy | GGRKQ>AVPKGATYGQPVHHGVNQLEFARSLQSVSKERAGRHCGALRALNSYWVGEDSTYRFFEVILIDP |
Parental | FHKAIRRNPDTQWITKPVHKHREMRGLTSA-GRKSRGLGKGHKFHHTIGGSRRAAWRRRNTLQLHRYR |
FHKAIRRNPDTQWIT.PVHKHREMRGLTSA.GRKSRGLGKGHKFH.TIGGSRRAAWRRRNTLQLHRYR | |
Retrocopy | FHKAIRRNPDTQWITRPVHKHREMRGLTSA<GRKSRGLGKGHKFHRTIGGSRRAAWRRRNTLQLHRYR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |