RetrogeneDB ID: | retro_mmur_1154 | ||
Retrocopylocation | Organism: | Mouse Lemur (Microcebus murinus) | |
Coordinates: | scaffold_26556:6727..7209(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | AP3S1 | ||
Ensembl ID: | ENSMICG00000006157 | ||
Aliases: | None | ||
Description: | adaptor-related protein complex 3, sigma 1 subunit [Source:HGNC Symbol;Acc:2013] |
Percent Identity: | 87.65 % |
Parental protein coverage: | 82.81 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 11 |
Parental | MIKAILIFNNHGKPRLSKFYQPYSEDTQQQIIR-ETFHLVSK-RDENVCNF-LEGGLLIGGSDNKLIYRH |
MIKAILIFNN.GKPRLSKFYQPYSEDTQQQIIR.ETFHLVSK.RDENVCNF.LEGGLLIGGSDNKLIYRH | |
Retrocopy | MIKAILIFNNYGKPRLSKFYQPYSEDTQQQIIR>ETFHLVSK>RDENVCNF>LEGGLLIGGSDNKLIYRH |
Parental | YATLYFVFCVDSSESELGILDLIQVFV-ETLD-KCFENVCEL-DLIFHVDK-VHNILAEM-VMGMVLE-T |
.ATLYFVFCVDSSESELGILDLIQVFV.ETLD..CFENVCEL.DLIF.VDK.VHNILAEM...GMVLE.T | |
Retrocopy | CATLYFVFCVDSSESELGILDLIQVFV<ETLD<QCFENVCEL>DLIFNVDK<VHNILAEM>EGGMVLE>T |
Parental | NMNEIVT-QID-AQNKLEKSEAGLAGAPAR |
NMNEIVT.QID.AQNKL....AGLAGAPAR | |
Retrocopy | NMNEIVT>QID>AQNKLGEI*AGLAGAPAR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |