RetrogeneDB ID: | retro_tsyr_949 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_25175:13970..14354(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | AP3S1 | ||
Ensembl ID: | ENSTSYG00000013231 | ||
Aliases: | None | ||
Description: | adaptor-related protein complex 3, sigma 1 subunit [Source:HGNC Symbol;Acc:2013] |
Percent Identity: | 85.61 % |
Parental protein coverage: | 68.06 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | SDNRLIYRHYATLYFVFCDSSSE--LGILDLIQVFVETLDKCFENVCELDLIFHVDKVHNILAEMVMGGM |
SDNRLIYRHYATLYFVFC.SSSE..LGILDLIQVFVET.DKCFENVCELDLIFHVDKVHNILA..VM... | |
Retrocopy | SDNRLIYRHYATLYFVFCVSSSESELGILDLIQVFVETFDKCFENVCELDLIFHVDKVHNILAQRVM--- |
Parental | VLETNMNEIVTQIDAQNKLEKSEAGLAGAPARAVSAVKNMNLPEIPRNINIGDISIKVPNLP |
.LETNMNE.VTQ.DAQNKLEKSE.GL.GAPA..VS.VKNMNL.EIPRN.NIGDISIKVPNLP | |
Retrocopy | ILETNMNEFVTQVDAQNKLEKSETGLVGAPASGVSVVKNMNLSEIPRN-NIGDISIKVPNLP |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |