RetrogeneDB ID: | retro_tbel_1662 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_5413:50226..50520(-) | ||
Located in intron of: | ENSTBEG00000012384 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | AP3S1 | ||
Ensembl ID: | ENSTBEG00000004775 | ||
Aliases: | None | ||
Description: | adaptor-related protein complex 3, sigma 1 subunit [Source:HGNC Symbol;Acc:2013] |
Percent Identity: | 73.47 % |
Parental protein coverage: | 57.99 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | QQIIRETFHLVSKRDENVCNFLEGGLLIGGSDNKLIYRHYATLYFVFCVDSSESELGILDLIQVFVETLD |
QQ.IRETFHLVSKRDEN...FLEGGLL......K.IYRHYA.L.FVF.VDSSES.L..L....VFVETLD | |
Retrocopy | QQGIRETFHLVSKRDENIYYFLEGGLLMKDLATKPIYRHYAVLCFVFYVDSSESKLSVLGCVHVFVETLD |
Parental | KCFENVCELDLIFHVDKVHNILAEMVMG |
KCFENV.ELDLIFHVDKVH..L..MVMG | |
Retrocopy | KCFENVYELDLIFHVDKVHSVLVGMVMG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |