RetrogeneDB ID: | retro_tsyr_1862 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_626322:428..749(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | AP3S1 | ||
Ensembl ID: | ENSTSYG00000013231 | ||
Aliases: | None | ||
Description: | adaptor-related protein complex 3, sigma 1 subunit [Source:HGNC Symbol;Acc:2013] |
Percent Identity: | 86.92 % |
Parental protein coverage: | 54.97 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | QPYSEDTQQQIIRETFHLVSKRDENVCNFLEGGLLIGGSDNRLIYRHYATLYFVFCDSS--SELGILDLI |
QP.SEDTQQQIIRETFH.VSKRDENVCNFLEGGLL.GGSD..LIYRHYATLYFVFC.....SELGILDLI | |
Retrocopy | QPCSEDTQQQIIRETFHMVSKRDENVCNFLEGGLLTGGSDDKLIYRHYATLYFVFCVDALESELGILDLI |
Parental | QVFVETLDKCFENVCELDLIFHVDKVHNILAEMVMGG |
.VFVET.DKCFENVCELDLIFHVDKVHNILAEMV..G | |
Retrocopy | LVFVETSDKCFENVCELDLIFHVDKVHNILAEMVRRG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |