Parental gene: | AP3S1, ENSTSYG00000013231 |
| Aliases: | None |
| Description: | adaptor-related protein complex 3, sigma 1 subunit [Source:HGNC Symbol;Acc:2013] |
| Organism: | Tarsier (Tarsius syrichta) |
| Coordinates: | GeneScaffold_4581:10477..68931(+) |
>ENSTSYG00000013231
ATGATCAAGGCGATCCTCATCTTCAACAACCACGGAAAGCCGCGGCTCTCCAAGTTCTACCAGCCCTACAGTGAAGATAC
ACAACAGCAAATCATCAGGGAGACTTTCCATTTGGTATCTAAGAGAGATGAAAATGTTTGTAATTTCCTAGAAGGAGGAT
TATTAATTGGAGGATCTGACAACAGACTGATTTATAGACATTATGCAACTTTATATTTTGTCTTCTGTGACTCTTCAAGT
GAACTTGGCATTTTAGATCTAATTCAAGTATTTGTGGAAACATTAGACAAATGTTTTGAAAATGTCTGTGAACTGGATTT
GATTTTCCACGTAGACAAGGTTCACAATATTCTTGCAGAAATGGTGATGGGGGGAATGGTATTGGAGACAAACATGAATG
AGATTGTTACACAAATTGATGCACAAAATAAACTGGAGAAATCTGAGGCTGGCTTAGCAGGAGCTCCAGCCCGTGCTGTA
TCTGCTGTAAAGAATATGAATCTTCCTGAGATCCCAAGAAATATTAACATTGGTGACATCAGTATAAAAGTGCCAAACCT
GCCCTCTTTTAAGTAA
ATGATCAAGGCGATCCTCATCTTCAACAACCACGGAAAGCCGCGGCTCTCCAAGTTCTACCAGCCCTACAGTGAAGATAC
ACAACAGCAAATCATCAGGGAGACTTTCCATTTGGTATCTAAGAGAGATGAAAATGTTTGTAATTTCCTAGAAGGAGGAT
TATTAATTGGAGGATCTGACAACAGACTGATTTATAGACATTATGCAACTTTATATTTTGTCTTCTGTGACTCTTCAAGT
GAACTTGGCATTTTAGATCTAATTCAAGTATTTGTGGAAACATTAGACAAATGTTTTGAAAATGTCTGTGAACTGGATTT
GATTTTCCACGTAGACAAGGTTCACAATATTCTTGCAGAAATGGTGATGGGGGGAATGGTATTGGAGACAAACATGAATG
AGATTGTTACACAAATTGATGCACAAAATAAACTGGAGAAATCTGAGGCTGGCTTAGCAGGAGCTCCAGCCCGTGCTGTA
TCTGCTGTAAAGAATATGAATCTTCCTGAGATCCCAAGAAATATTAACATTGGTGACATCAGTATAAAAGTGCCAAACCT
GCCCTCTTTTAAGTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000000203 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000016767 | ortholog_one2one | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000007192 | ortholog_one2one | 3 retrogenes | |
| Felis catus | ENSFCAG00000029920 | ortholog_one2one | 3 retrogenes | |
| Homo sapiens | ENSG00000177879 | ortholog_one2one | 3 retrogenes | |
| Gorilla gorilla | ENSGGOG00000016895 | ortholog_one2one | 2 retrogenes | |
| Loxodonta africana | ENSLAFG00000015311 | ortholog_one2many | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000010623 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000006157 | ortholog_one2one | 4 retrogenes | |
| Myotis lucifugus | ENSMLUG00000002769 | ortholog_one2one | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000015288 | ortholog_one2one | 2 retrogenes | |
| Mustela putorius furo | ENSMPUG00000000782 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000024480 | ortholog_one2one | 4 retrogenes | |
| Otolemur garnettii | ENSOGAG00000032376 | ortholog_one2one | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000009176 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000015700 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000017155 | ortholog_one2one | 5 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000006575 | ortholog_one2one | 3 retrogenes | |
| Rattus norvegicus | ENSRNOG00000003829 | ortholog_one2one | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000001176 | ortholog_one2one | 2 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000011759 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000004775 | ortholog_one2one | 7 retrogenes | |
| Tursiops truncatus | ENSTTRG00000000813 | ortholog_one2one | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_tsyr_58 | 89.58 | 98.43 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_tsyr_941 | 88.66 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_tsyr_949 | 85.61 | 68.06 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_tsyr_1099 | 71.25 | 81.15 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_tsyr_1234 | 94.12 | 52.88 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_tsyr_1354 | 73.79 | 52.88 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_tsyr_1431 | 70.00 | 81.15 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_tsyr_1862 | 86.92 | 54.97 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_tsyr_1960 | 72.52 | 67.02 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSTSYG00000013231 retrocopies