RetrogeneDB ID: | retro_tbel_3282 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_135885:54931..55276(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTBEG00000016254 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 76.47 % |
Parental protein coverage: | 95.93 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | GEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGI |
G..KKG.SAINE....EYTI.IHK..HG.G.KK.AP.ALKEI.KF.MKEMG.PDV.IDTRLNKAVWAK.I | |
Retrocopy | GDEKKGHSAINE----EYTISIHK*THGMGCKKCAPWALKEIWKFSMKEMGDPDVCIDTRLNKAVWAKAI |
Parental | RNVPYRIRVRLSRKRNEDEDSPNKLYTL-VTYVPVTTFKNLQTVNVDEN |
RNVPYRI...LSRK.NEDEDSPN.LYTL..TYVPVTTFKNLQ.VNV.EN | |
Retrocopy | RNVPYRIHAQLSRK*NEDEDSPNELYTLYLTYVPVTTFKNLQIVNVNEN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |