RetrogeneDB ID: | retro_tbel_3869 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_25171:596..944(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTBEG00000016254 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 76.07 % |
Parental protein coverage: | 95.12 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | PAKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAV |
P.KKGGEKK.G.SAINE.VT.EYTINIHKRI.G..FKK..PRALK.I.KF.MKEMGTPDV.ID.RLNKA. | |
Retrocopy | PEKKGGEKK-GHSAINELVTWEYTINIHKRIQGMAFKKHTPRALKVIWKFTMKEMGTPDVCIDARLNKAD |
Parental | WAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQT |
W.K.IRNV.Y.I.V.LSRK.N.DEDSPN.LYTL.TYVP.TTFKNL.T | |
Retrocopy | WVKRIRNVRYQIHVWLSRKLNKDEDSPNNLYTLMTYVPITTFKNL*T |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |