RetrogeneDB ID: | retro_tbel_914 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_3303:22556..22881(-) | ||
Located in intron of: | ENSTBEG00000005911 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTBEG00000016254 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 72.97 % |
Parental protein coverage: | 89.43 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 1 |
Parental | PAKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAV |
PAKKGGE.K.G.SAINEVV..EYTI.I.K.IHGV.F.K.A..ALKEI..FA.KEMGTPDV.IDTRLNK.V | |
Retrocopy | PAKKGGETK-GHSAINEVVAQEYTI-INKCIHGVSF*K*ALWALKEIW*FARKEMGTPDVGIDTRLNKPV |
Parental | WA-KGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVT |
W...GIR.V.Y.I...LSRK.NEDE.SPNK.YTLVTYVPVT | |
Retrocopy | WT>EGIRTVSYSIYMWLSRKCNEDEYSPNKVYTLVTYVPVT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |