RetrogeneDB ID: | retro_ttru_1464 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | scaffold_114093:132017..132423(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL28 | ||
Ensembl ID: | ENSTTRG00000002428 | ||
Aliases: | None | ||
Description: | ribosomal protein L28 [Source:HGNC Symbol;Acc:10330] |
Percent Identity: | 58.7 % |
Parental protein coverage: | 99.27 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 2 |
Parental | SAHLQWMVVRNCSSFLIKRNKQTYSTEPNNLKARNSFRYNGLIHRKTV-GVEPAADGKGVVVVMKRRSGQ |
S.HLQ.MV..NCS.F.IK.NKQ...T.PNNLK..NSF.YN.L...KTV.GVE.AA.G.....V.K.R.G. | |
Retrocopy | STHLQ*MVLWNCSNFRIKKNKQI*GTHPNNLKVHNSFHYNRLMDHKTV<GVELAAGGRSGLEVVKWRTGL |
Parental | RKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAILRS-QKPVMVKRKRTRPTKSS |
.KPATSY..TTINKN..ATLSSI...I.K.KY...L.....RRA.AIL.S.Q.PV.VKR....PTKSS | |
Retrocopy | TKPATSYMQTTINKNSPATLSSI*NIICKIKYLWYLSIVSNRRARAILHS<QTPVTVKRRQMCPTKSS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |