Parental gene: | EWSR1, ENSAMEG00000008298 |
| Aliases: | None |
| Description: | EWS RNA-binding protein 1 [Source:HGNC Symbol;Acc:3508] |
| Organism: | Panda (Ailuropoda melanoleuca) |
| Coordinates: | GL192437.1:2274610..2297312(-) |
>ENSAMEG00000008298
TTGTTTTCTCTAGATTACAGTACCTACAGCCAAGCTGCAGCCCAGCAGGGCTACAGTGCATACACCGCCCAACCCACTCA
AGGATATGCACAGACCACCCAGGCATATGGGCAGAAAAGTTATGGAACCTATGGACAGCCCACTGATGTCAGCTATACCC
AGGCTCAGACCACTGCGACCTATGGGCAGACTGCCTATGCAACTTCTTATGGACAGCCTCCCGCTGTAGAAGGGACCAGT
ACAGGTTATACTACTCCAACTGCCCCCCAGGCATACAGTCAGCCTGTCCAGGGGTACGGCACTGGTGCTTACGATACCAC
CACTGCTACAGTCACTACCACCCAGGTCTCCTATGCAGCTCAGTCTGCGTGTGGCACTCAGCCTGTTTACCCAGCCTATG
GGCAGCAGCCAGCAGCCACTGCACCTGCAAGACCGCAGGATGGTAACAAACCCGCTGAGACTAGTCAACCTCAATCTAGC
ACAGGGGGTTACAACCAGCCCAGCCTAGGATATGGACAGAGTAACTACAGTTATCCCCAGGTACCTGGGAGCTACCCCAT
GCAGCCAGTTACGGCACCACCATCTTACCCTCCTACCAGCTACTCCTCTACACAGCCGACTAGTTATGATCAGAGCAGTT
ACTCTCAGCAGAACACCTATGGGCAGCCGAGCAGCTATGGACAGCAGAGTAGCTATGGTCAACAAAGCAGCTATGGGCAG
CAGCCGCCCACTAGTTATCCCCCCCAAACTGGATCCTACAGCCAGGCTCCAAGTCAATATAGCCAACAGAGCAGCAGCTA
CGGGCAGCAGAGTTCATTCCGACAGGACCACCCCAGTAGCATGGGTGTTTATGGGCAGGAGTCTGGAGGATTTTCCGGAC
CAGGAGAGAACCGGAGCATGAGTGGCCCTGATAACCGGGGCAGGGGAAGAGGGGGATTTGATCGTGGAGGCATGAGCAGA
GGTGGGCGGGGAGGAGGACGCGGTGGAATGGGCGCTGGAGAGCGAGGTGGCTTCAATAAGCCTGGTGGACCCATGGACGA
AGGACCAGATCTTGATCTAGGCCCACCTGTAGACCCAGATGAAGACTGTGACAACAGTGCGATTTATGTGCAAGGCTTAA
ATGACAGTGTGACGCTGGATGATCTGGCAGACTTCTTTAAGCAGTGTGGGGTTGTTAGGATGAACAAGAGAACCGGACAA
CCCATGATCCATATCTACTTGGACAAGGAAACAGGAAAGCCCAAAGGAGATGCTACAGTGTCCTATGAAGACCCACCAAC
CGCCAAGGCTGCCGTGGAGTGGTTTGATGGGAAAGATTTCCAAGGGAGCAAGCTTAAGGTGTCTTTTGCTCGGAAGAAGC
CTCCGATGAACAGCATGCGGGGTGCTATGCCTCCTCGTGAGGGCAGAGGGATGCCGCCGCCACTCCGTGGAGGTCCCGGG
GGCCCAGGAGGTCCTGGGGGCCCCATGGGTCGCATGGGAGGCCGTGGAGGAGACAGAGGTGGCTTTCCTCCAAGAGGGCC
CCGGGGTTCCCGAGGGAACCCATCCGGAGGAGGAAACGTCCAGCACCGAGCTGGAGACTGGCAGTGTCCCAATCCGGGGT
GTGGAAACCAGAACTTCGCCTGGAGAACAGAATGCAACCAGTGTAAGGCCCCAAAGCCTGAAGGCTTCCTTCCACCACCC
TTTCCACCCCCGGGCGGTGACCGTGGCAGAGGCGGCCCTGGTGGCATGCGGGGCGGAAGAGGCGGCCTCATGGACCGCGG
TGGTCCCGGTGGCATGTTCAGAGGTGGCCGCGGTGGAGACAGAGGGGGCTTCCGTGGTGGCCGGGGCATGGACCGAGGTG
GCTTCGGTGGAGGAAGACGGGGCGGCCCTGGTGGGCCCCCTGGACCTTTGATGGAACAGATGGGAGGAAGAAGAGGCGGG
CGCGGAGGACCTGGAAAAATGGATAAAGGCGAGCACCGTCAGGAACGCAGAGACCGGCCCTAC
TTGTTTTCTCTAGATTACAGTACCTACAGCCAAGCTGCAGCCCAGCAGGGCTACAGTGCATACACCGCCCAACCCACTCA
AGGATATGCACAGACCACCCAGGCATATGGGCAGAAAAGTTATGGAACCTATGGACAGCCCACTGATGTCAGCTATACCC
AGGCTCAGACCACTGCGACCTATGGGCAGACTGCCTATGCAACTTCTTATGGACAGCCTCCCGCTGTAGAAGGGACCAGT
ACAGGTTATACTACTCCAACTGCCCCCCAGGCATACAGTCAGCCTGTCCAGGGGTACGGCACTGGTGCTTACGATACCAC
CACTGCTACAGTCACTACCACCCAGGTCTCCTATGCAGCTCAGTCTGCGTGTGGCACTCAGCCTGTTTACCCAGCCTATG
GGCAGCAGCCAGCAGCCACTGCACCTGCAAGACCGCAGGATGGTAACAAACCCGCTGAGACTAGTCAACCTCAATCTAGC
ACAGGGGGTTACAACCAGCCCAGCCTAGGATATGGACAGAGTAACTACAGTTATCCCCAGGTACCTGGGAGCTACCCCAT
GCAGCCAGTTACGGCACCACCATCTTACCCTCCTACCAGCTACTCCTCTACACAGCCGACTAGTTATGATCAGAGCAGTT
ACTCTCAGCAGAACACCTATGGGCAGCCGAGCAGCTATGGACAGCAGAGTAGCTATGGTCAACAAAGCAGCTATGGGCAG
CAGCCGCCCACTAGTTATCCCCCCCAAACTGGATCCTACAGCCAGGCTCCAAGTCAATATAGCCAACAGAGCAGCAGCTA
CGGGCAGCAGAGTTCATTCCGACAGGACCACCCCAGTAGCATGGGTGTTTATGGGCAGGAGTCTGGAGGATTTTCCGGAC
CAGGAGAGAACCGGAGCATGAGTGGCCCTGATAACCGGGGCAGGGGAAGAGGGGGATTTGATCGTGGAGGCATGAGCAGA
GGTGGGCGGGGAGGAGGACGCGGTGGAATGGGCGCTGGAGAGCGAGGTGGCTTCAATAAGCCTGGTGGACCCATGGACGA
AGGACCAGATCTTGATCTAGGCCCACCTGTAGACCCAGATGAAGACTGTGACAACAGTGCGATTTATGTGCAAGGCTTAA
ATGACAGTGTGACGCTGGATGATCTGGCAGACTTCTTTAAGCAGTGTGGGGTTGTTAGGATGAACAAGAGAACCGGACAA
CCCATGATCCATATCTACTTGGACAAGGAAACAGGAAAGCCCAAAGGAGATGCTACAGTGTCCTATGAAGACCCACCAAC
CGCCAAGGCTGCCGTGGAGTGGTTTGATGGGAAAGATTTCCAAGGGAGCAAGCTTAAGGTGTCTTTTGCTCGGAAGAAGC
CTCCGATGAACAGCATGCGGGGTGCTATGCCTCCTCGTGAGGGCAGAGGGATGCCGCCGCCACTCCGTGGAGGTCCCGGG
GGCCCAGGAGGTCCTGGGGGCCCCATGGGTCGCATGGGAGGCCGTGGAGGAGACAGAGGTGGCTTTCCTCCAAGAGGGCC
CCGGGGTTCCCGAGGGAACCCATCCGGAGGAGGAAACGTCCAGCACCGAGCTGGAGACTGGCAGTGTCCCAATCCGGGGT
GTGGAAACCAGAACTTCGCCTGGAGAACAGAATGCAACCAGTGTAAGGCCCCAAAGCCTGAAGGCTTCCTTCCACCACCC
TTTCCACCCCCGGGCGGTGACCGTGGCAGAGGCGGCCCTGGTGGCATGCGGGGCGGAAGAGGCGGCCTCATGGACCGCGG
TGGTCCCGGTGGCATGTTCAGAGGTGGCCGCGGTGGAGACAGAGGGGGCTTCCGTGGTGGCCGGGGCATGGACCGAGGTG
GCTTCGGTGGAGGAAGACGGGGCGGCCCTGGTGGGCCCCCTGGACCTTTGATGGAACAGATGGGAGGAAGAAGAGGCGGG
CGCGGAGGACCTGGAAAAATGGATAAAGGCGAGCACCGTCAGGAACGCAGAGACCGGCCCTAC
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000012160 | possible_ortholog | 8 retrogenes | |
| Callithrix jacchus | ENSCJAG00000019987 | possible_ortholog | 4 retrogenes | |
| Homo sapiens | ENSG00000182944 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000012212 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000008703 | possible_ortholog | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000012058 | possible_ortholog | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000008679 | possible_ortholog | 1 retrogene | |
| Mus musculus | ENSMUSG00000009079 | possible_ortholog | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000004432 | possible_ortholog | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000011684 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000014218 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000023177 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000011881 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_amel_191 | 88.43 | 99.54 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_amel_959 | 81.92 | 68.84 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSAMEG00000008298 retrocopies