Parental gene:

EWSR1, ENSSTOG00000023177

Aliases:None
Description:EWS RNA-binding protein 1 [Source:HGNC Symbol;Acc:3508]
Organism:Squirrel (Ictidomys tridecemlineatus)
Coordinates:JH393467.1:3300353..3323308(+)


>ENSSTOG00000023177
GATTACAGTACCTACAGCCAAGCTGCAGCCCAGCAGGGCTACAGTGCTTACACCGCCCAGCCAACTCAAGGATATGCACA
GACCACCCAGGCATATGGGCAACAAAGCTATGGAACTTATGGACAGCCTACTGATGTCAGCTATACCCAGGCTCAGACCA
CTGCCACCTATGGGCAGACTGCATATGCAACTTCTTATGGACAGCCTCCCACTGTAGAAGGGACCAGTACAGGTTATACT
ACCCCAACTGCCCCCCAGGCATACAGCCAGCCTGTCCAGGGGTACGGCACTGGTGCTTATGACACCACCACCGCTACCGT
CACCACCACCCAGGCCTCCTATGCAGCCCAGTCTGCATATGGGACTCAGCCTGCTTACCCTGGCTATGGGCAACAGCCAG
CAGCCACTGCACCTGCAAGACCGCAGGATGGTAACAAGCCCGCTGAGACTAGTCAACCTCAGTCTAGCACAGGGGGTTAT
AACCAGCCCAGCCTAGGATACGGACAGAGTAACTACAGTTATCCCCAGGTTCCTGGGAGCTACCCCATGCAGCCAGTTAC
CGCGCCTCCATCCTATCCTCCTACCAGCTATTCCTCTACACAGCCGACTAGTTATGATCAGAGCAGTTACTCTCAGCAGA
ACACCTATGGGCAACCGAGCAGCTATGGACAGCAGAGTAGCTATGGTCAACAAAGCAGCTATGGGCAGCAGCCTCCCACT
AGTTACCCCCCCCAGACTGGATCCTACAGCCAGGCTCCAAGTCAATATAGCCAACAGAGCAGCAGCTACGGGCAGCAGAG
TTCATTCCGACAGGACCACCCCAGTAGCATGGGTGTTTATGGGCAGGAGTCTGGAGGATTTTCCGGACCAGGAGAGAACC
GGAGCATGAGTGGCCCTGATAACCGGGGCAGGGGAAGAGGGGGATTTGATCGTGGAGGCATGAGCAGAGGTGGGCGGGGA
GGAGGACGCGGTGGAATGGGCGCTGGAGAGCGAGGTGGCTTCAATAAGCCTGGTGGACCCATGGATGAAGGACCAGATCT
TGATCTAGGCCCTCCAGTAGATCCTGATGAAGACTCTGACAACAGTGCAGTTTATGTGCAAGGATTAAATGACAATGTGA
CTCTTGATGATCTGGCAGATTTCTTTAAGCAGTGTGGGGTTGTTAAGATGAATAAGAGAACTGGGCAACCCATGATCCAC
ATCTACCTGGACAAGGAAACAGGAAAGCCCAAAGGTGATGCCACAGTGTCCTATGAAGACCCGCCAACTGCCAAGGCTGC
TGTGGAGTGGTTTGATGGAAAAGATTTTCAAGGAAGCAAACTAAAAGTCACTCTTGCTCGAAAGAAGCCTCCCATGAACA
GCATGCGGGGTGGCATGCCACCTCGTGAGGGCAGAGGGATGCCACCACCACTCCGTGGAGGTCCAGGTGGCCCAGGAGGT
CCTGGGGGACCCATGGGTCGCATGGGAGGCCGTGGAGGAGACAGAGGAGGTTTTCCCCCAAGAGGGCCACGGGGTTCCCG
AGGGAATCCCTCTGGAGGAGGAAACGTCCAGCACCGAGCTGGGGACTGGCAATGTCCCAATCCGGGTTGTGGAAACCAGA
ACTTCGCCTGGAGAACAGAATGCAACCAGTGTAAGGCCCCGAAACCTGAGGGCTTTCTCCCACCACCCTTCCCACCCCCG
GGTGGTGACCGTGGAAGAGGTGGCCCTGGTGGCATGCGAGGAGGAAGAGGTGGCCTCATGGACCGCGGCGGTCCTGGAGG
AATGTTCAGAGGTGGCCGTGGTGGAGACAGGGGTGGCTTCCGTGGTGGCCGTGGCATGGACCGAGGTGGCTTTGGCGGAG
GAAGACGAGGTGGTCCAGGGGGTCCCCCTGGACCTTTAATGGAGCAGATGGGAGGAAGAAGAGGTGGACGTGGAGGACCT
GGAAAAATGGATAAAGGCGAGCATCGTCAGGAACGCAGAGATCGGCCCTACTAG

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000008298 ortholog_one2one 2 retrogenes
retro_amel_191, retro_amel_959,
Canis familiaris ENSCAFG00000012160 possible_ortholog 8 retrogenes
retro_cfam_1142, retro_cfam_1183, retro_cfam_1225, retro_cfam_133, retro_cfam_1397, retro_cfam_1736, retro_cfam_1889, retro_cfam_560,
Callithrix jacchus ENSCJAG00000019987 possible_ortholog 4 retrogenes
retro_cjac_1716, retro_cjac_2022, retro_cjac_2813, retro_cjac_2911,
Cavia porcellus ENSCPOG00000009502 possible_ortholog 1 retrogene
retro_cpor_1353,
Felis catus ENSFCAG00000004243 possible_ortholog 1 retrogene
retro_fcat_519,
Homo sapiens ENSG00000182944 ortholog_one2one 1 retrogene
retro_hsap_463,
Gorilla gorilla ENSGGOG00000012212 ortholog_one2one 1 retrogene
retro_ggor_444,
Macropus eugenii ENSMEUG00000008703 possible_ortholog 1 retrogene
retro_meug_1424,
Myotis lucifugus ENSMLUG00000012058 possible_ortholog 1 retrogene
retro_mluc_328,
Monodelphis domestica ENSMODG00000008679 possible_ortholog 1 retrogene
retro_mdom_279,
Mustela putorius furo ENSMPUG00000013432 possible_ortholog 2 retrogenes
retro_mputfur_56, retro_mputfur_572,
Mus musculus ENSMUSG00000009079 possible_ortholog 1 retrogene
retro_mmus_1379,
Oryctolagus cuniculus ENSOCUG00000004432 possible_ortholog 2 retrogenes
retro_ocun_1346, retro_ocun_242,
Pongo abelii ENSPPYG00000011684 ortholog_one2one 1 retrogene
retro_pabe_1769,
Pan troglodytes ENSPTRG00000014218 ortholog_one2one 1 retrogene
retro_ptro_350,
Tursiops truncatus ENSTTRG00000011881 ortholog_one2one 1 retrogene
retro_ttru_1366,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_itri_1892 88.24 63.93
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Download FASTA sequences of all ENSSTOG00000023177 retrocopies