Parental gene:

ENSMODG00000008679

Aliases:None
Description:None
Organism:Opossum (Monodelphis domestica)
Coordinates:3:517836466..517865045(+)


>ENSMODG00000008679
ATGGCGTCCACGGACTATAGTACCTACAGTCAAGCTGCAGCCCAGCAGGGCTACAGTGCTTATGCAGCCCAGCCAGCTCA
AGGATATGCACAGACCACCCAGGCATATGGGCAACAAAGTTATGGAGCCTACGGGCAGCCTACTGATGTCAGCTATACAC
AGGCTCAAACAACTGCGACATATGGGCAGACTGCGTATGCAACCTCTTATGGACAGCCTCCAACAGTAGAAGGGGCCGGT
ACAGGTTATACTACACCAACCGCACCTCAAGCTTACAGTCAGCCTGTCCAAGGATATGGCACGGGGGCCTACGATACCAC
CACTGCTACAGTTACGACCACCCAAGCATCCTATGCAGCCCAATCTGCATATGGCACCCAGCCTGCTTACCCAACCTATG
GGCAGCAGCCAGCAACTGCAGCCCCTGCAAGACCCCAGGATGGTAGCAAGCCCGCTGAGACTAGTCAGCCTCAATCTAGT
ACAGCAGGCTACAGCCAACCCAGCCTAGGATACGGGCAGAGCAACTACAGTTACCCACAGGTGCCGGGCAGCTACCCCAT
GCAGCCAGTCACCGCACCTCCATCCTATCCTCCAACCAGCTATTCCTCTACCCAGCCGACTAGTTACGATCAGAGCAGTT
ACTCCCAGCAGAATACCTATGGGCAGCAGAGCAGCTATGGACAGCAGAGTAGCTATGGTCAACAGAGCAGCTATGGGCAG
CAGCCCCCCACTAGTTATCCCCCCCAAACTGGATCCTACAGCCAGGCTCCAAGTCAATATAGCCAACAGAGCAGCAGCTA
CGGGCAGCAGAGTGCGTTCCGGCAGGACCATCCCAGTAGCATGGGTGTATATGGGCAGGAGTCTGGAGGCTTTTCCGGAC
CTGGAGAAAACCGGAGCATGAGTGGCCCTGATAACCGGGGCAGGGGAAGAGGGGGATTTGATCGTGGAGGCATGAGCAGA
GGTGGGCGGGGAGGAGGAGGAGGAGGACGCGGTGGAATGGGCGCTGGAGAGCGAGGTGGCTTCAATAAGCCTGGTGGACC
TATGGAAGAAGGACCAGACCTTGACTTAGGCTCACCTGTAGATCCAGATGAAGACTCCGAAAACAGTGCAATTTATGTAC
AGGGACTGAATGAAAGTGTGACTGCTGACGAGCTGGCAGACTTTTTCAAACAGTGTGGGGTTGTCAAGATGAACAAAAGG
ACTGGGCAGCCGATGATAAACATTTACTTAGACAAGGAAACCGGGAAACCCAAAGGAGATGCCACCGTGTCCTATGATGA
CCCACCTACTGCAAAGGCTGCAGTAGAATGGTTTGATGGGAAAGATTTCCAAGGGAGCAAACTCAAAGTGTCTCTTGCTC
GGAAGAAACCTCCAATGAATAGCATGCGAGGTGGTATGCCACCCCGCGAAGGCAGAGGGATGCCTCCCCCTCTCCGAGGA
GGTCCTGGAGGACCAGGGGGGCCAGGAGGTCCCATGGGTCGAATGGGAGGCAGAGGAGGAGACAGGGGAGGTTTTCCACC
AAGAGGACCCAGGGGTTCCCGTGGAAACCCCTCAGGAGGAGGAAATGTCCAGCACAGAGCAGGGGATTGGCAGTGCCCTA
ATCCAGGCTGCGGAAACCAGAATTTTGCCTGGAGAACAGAGTGTAATCAGTGCAAGGCCCCTAAGCCGGAGGGATTTCTG
CCACCACCCTTTCCACCTCCGGGTGGTGATCGTGGCAGAGGTGGCCCCGGTGGCATGAGGGGTGGCAGAGGTGGCCTCAT
GGACCGTGGTGGGCCTGGCGGTATGTTCCGAGGAGGCCGAGGTGGAGACAGAGGCGGCTTTCGGGGAGGTCGAGGCATGG
ACCGAGGGGGCTTTGGTGGAGGAAGAAGAGGAGGCCCTGGGGGTCCTCCTGGACCTCTCATGGAGCAAATGGGCGGCAGA
AGAGGAGGGCGTGGCGGGCCCGGAAAGATGGATAAAGGCGAGCATCGCCAGGAGCGCAGAGACCGGCCCTACTAG

Library Parental gene expression (RPM)
SRP007412_brain 0 .00 RPM
SRP007412_cerebellum 0 .00 RPM
SRP007412_heart 0 .00 RPM
SRP007412_kidney 0 .00 RPM
SRP007412_liver 0 .00 RPM
SRP007412_testis 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000008298 possible_ortholog 2 retrogenes
retro_amel_191, retro_amel_959,
Canis familiaris ENSCAFG00000012160 possible_ortholog 8 retrogenes
retro_cfam_1142, retro_cfam_1183, retro_cfam_1225, retro_cfam_133, retro_cfam_1397, retro_cfam_1736, retro_cfam_1889, retro_cfam_560,
Callithrix jacchus ENSCJAG00000019987 possible_ortholog 4 retrogenes
retro_cjac_1716, retro_cjac_2022, retro_cjac_2813, retro_cjac_2911,
Cavia porcellus ENSCPOG00000009502 possible_ortholog 1 retrogene
retro_cpor_1353,
Felis catus ENSFCAG00000004243 possible_ortholog 1 retrogene
retro_fcat_519,
Homo sapiens ENSG00000182944 possible_ortholog 1 retrogene
retro_hsap_463,
Gorilla gorilla ENSGGOG00000012212 possible_ortholog 1 retrogene
retro_ggor_444,
Macropus eugenii ENSMEUG00000008703 ortholog_many2many 1 retrogene
retro_meug_1424,
Myotis lucifugus ENSMLUG00000012058 possible_ortholog 1 retrogene
retro_mluc_328,
Mustela putorius furo ENSMPUG00000013432 possible_ortholog 2 retrogenes
retro_mputfur_56, retro_mputfur_572,
Mus musculus ENSMUSG00000009079 possible_ortholog 1 retrogene
retro_mmus_1379,
Oryctolagus cuniculus ENSOCUG00000004432 possible_ortholog 2 retrogenes
retro_ocun_1346, retro_ocun_242,
Pongo abelii ENSPPYG00000011684 possible_ortholog 1 retrogene
retro_pabe_1769,
Pan troglodytes ENSPTRG00000014218 possible_ortholog 1 retrogene
retro_ptro_350,
Ictidomys tridecemlineatus ENSSTOG00000023177 possible_ortholog 1 retrogene
retro_itri_1892,
Tursiops truncatus ENSTTRG00000011881 possible_ortholog 1 retrogene
retro_ttru_1366,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_279 72.44 67.32
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSMODG00000008679 retrocopies