Parental gene:

EWSR1, ENSGGOG00000012212

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:22:13343564..13376699(+)


>ENSGGOG00000012212
ATGGCGTCCACGGATTACAGTACCTATAGCCAAGCTGCAGCGCAGCAGGGCTACAGTGCTTACACCGCCCAGCCCACTCA
AGGATATGCACAGACCACCCAGCAGGCATATGGGCAACAAAGCTATGGAACCTATGGACAGCCCACTGATGTCAGCTATA
CCCAGGCTCAGACCACTGCAACCTATGGGCAGACCGCCTATGCAACTTCTTATGGACAGCCTCCCACTGGTTATACTACT
CCGACTGCCCCCCAGGCATACAGCCAGCCTGTCCAGGGGTATGGCACTGGTGCTTATGATACCACCACTGCTACAGTCAC
CACCACCCAGGCCTCCTATGCAGCTCAGTCTGCATATGGCACTCAGCCTGCTTATCCAGCCTATGGGCAGCAGCCAGCAG
CCACTGCACCTACAAGACCGCAGGATGGAAACAAGCCCACTGAGACTAGTCAACCTCAATCTAGCACAGGGGGTTACAAC
CAGCCCAGCCTAGGATATGGACAGAGTAACTACAGTTATCCCCAGGTACCTGGGAGCTACCCCATGCAGCCAGTCACCGC
ACCTCCATCCTACCCTCCTACCAGAAAAAGCTTTTTTTCTCTCTCTTCTCTCTCTTTCAGCTATTCCTCTACACAGCCGA
CTAGTTATGATCAGAGCAGTTACTCTCAGCAGAACACCTATGGGCAACCGAGCAGCTATGGACAGCAGAGTAGCTATGGT
CAACAAAGCAGCTATGGGCAGCAGCCTCCCACTAGTTACCCACCCCAAACTGGATCCTACAGCCAAGCTCCAAGTCAATA
TAGCCAACAGAGCAGCAGCTACGGGCAGCAGAGTTCATTCCGACAGGACCACCCCAGTAGCATGGGTGTTTATGGGCAGG
AGTCTGGAGGATTTTCCGGACCAGGAGAGAACCGGAGCATGAGTGGCCCTGATAACCGGGGCAGGGGAAGAGGGGGATTT
GATCGTGGAGGCATGAGCAGAGGTGGGCGGGGAGGAGGACGCGGTGGAATGGGCAGCGCTGGAGAGCGAGGTGGCTTCAA
TAAGCCTGGTGGACCCATGGATGAAGGACCAGATCTTGATCTAGGCCCACCTGTAGATCCAGATGAAGACTCTGACAACA
GTGCAATTTATGTACAAGGATTAAATGACAGTGTGACTCTAGATGATCTGGCAGACTTCTTTAAGCAGTGTGGGGTTGTT
AAGATGAACAAGAGAACTGGGCAACCCATGATCCACATCTACCTGGACAAGGAAACAGGAAAGCCCAAAGGCGATGCCAC
AGTGTCCTATGAAGACCCACCTACTGCCAAGGCTGCCGTGGAATGGTTTGATGGGAAAGATTTTCAAGGGAGCAAACTTA
AAGTCTCCCTTGCTCGGAAGAAGCCTCCAATGAACAGTATGCGGGGTGGTATGCCACCCCGTGAGGGCAGAGGGATGCCA
CCACCACTCCGCGGAGGTCCAGGAGGCCCAGGAGGTCCTGGGGGACCCATGGGTCGCATGGGAGGCCGTGGAGGAGATAG
AGGAGGCTTCCCTCCAAGAGGACCCCGGGGTTCCCGAGGGAACCCCTCTGGAGGAGGAAACGTCCAGCACCGAGCTGGAG
ACTGGCAGTGTCCCAATCCGGGTTGTGGAAACCAGAACTTCGCCTGGAGAACAGAGTGCAACCAGTGTAAGGCCCCAAAG
CCTGAAGGCTTCCTCCCGCCACCCTTCCCGCCCCCGGGTGGTGATCGTGGCAGAGGTGGCCCTGGTGGCATGCGGGGAGG
AAGAGGTGGCCTCATGGATCGTGGTGGTCCCGGTGGAATGTTCAGAGGTGGCCGTGGTGGCGACAGAGGTGGCTTCCGTG
GTGGCCGGGGCATGGACCGAGGTGGCTTTGGTGGAGGAAGACGAGGTGGCCCTGGGGGGCCCCCTGGACCTTTGATGGAA
CAGATGGGAGGAAGAAGAGGAGGACGTGGAGGACCTGGAAAAATGGATAAAGGCGAGCACCGTCAGGAGCGCAGAGATCG
GCCCTACTAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 170 .04 RPM
SRP007412_cerebellum 200 .81 RPM
SRP007412_heart 63 .79 RPM
SRP007412_kidney 127 .49 RPM
SRP007412_liver 86 .70 RPM
SRP007412_testis 302 .72 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000008298 ortholog_one2one 2 retrogenes
retro_amel_191, retro_amel_959,
Canis familiaris ENSCAFG00000012160 possible_ortholog 8 retrogenes
retro_cfam_1142, retro_cfam_1183, retro_cfam_1225, retro_cfam_133, retro_cfam_1397, retro_cfam_1736, retro_cfam_1889, retro_cfam_560,
Callithrix jacchus ENSCJAG00000019987 possible_ortholog 4 retrogenes
retro_cjac_1716, retro_cjac_2022, retro_cjac_2813, retro_cjac_2911,
Homo sapiens ENSG00000182944 ortholog_one2one 1 retrogene
retro_hsap_463,
Macropus eugenii ENSMEUG00000008703 possible_ortholog 1 retrogene
retro_meug_1424,
Myotis lucifugus ENSMLUG00000012058 possible_ortholog 1 retrogene
retro_mluc_328,
Monodelphis domestica ENSMODG00000008679 possible_ortholog 1 retrogene
retro_mdom_279,
Oryctolagus cuniculus ENSOCUG00000004432 possible_ortholog 2 retrogenes
retro_ocun_1346, retro_ocun_242,
Pongo abelii ENSPPYG00000011684 ortholog_one2one 1 retrogene
retro_pabe_1769,
Pan troglodytes ENSPTRG00000014218 ortholog_one2one 1 retrogene
retro_ptro_350,
Ictidomys tridecemlineatus ENSSTOG00000023177 ortholog_one2one 1 retrogene
retro_itri_1892,
Tursiops truncatus ENSTTRG00000011881 ortholog_one2one 1 retrogene
retro_ttru_1366,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_444 89.57 62.93
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Download FASTA sequences of all ENSGGOG00000012212 retrocopies