Parental gene:

EWSR1, ENSG00000182944

Aliases:EWSR1, EWS, bK984G1.4
Description:EWS RNA-binding protein 1 [Source:HGNC Symbol;Acc:3508]
Organism:Human (Homo sapiens)
Coordinates:22:29663997..29696515(+)


>ENSG00000182944
ATGGCGTCCACGGATTACAGTACCTATAGCCAAGCTGCAGCGCAGCAGGGCTACAGTGCTTACACCGCCCAGCCCACTCA
AGGATATGCACAGACCACCCAGGCATATGGGCAACAAAGCTATGGAACCTATGGACAGCCCACTGATGTCAGCTATACCC
AGGCTCAGACCACTGCAACCTATGGGCAGACCGCCTATGCAACTTCTTATGGACAGCCTCCCACTGTAGAAGGGACCAGT
ACAGGTTATACTACTCCAACTGCCCCCCAGGCATACAGCCAGCCTGTCCAGGGGTATGGCACTGGTGCTTATGATACCAC
CACTGCTACAGTCACCACCACCCAGGCCTCCTATGCAGCTCAGTCTGCATATGGCACTCAGCCTGCTTATCCAGCCTATG
GGCAGCAGCCAGCAGCCACTGCACCTACAAGACCGCAGGATGGAAACAAGCCCACTGAGACTAGTCAACCTCAATCTAGC
ACAGGGGGTTACAACCAGCCCAGCCTAGGATATGGACAGAGTAACTACAGTTATCCCCAGGTACCTGGGAGCTACCCCAT
GCAGCCAGTCACTGCACCTCCATCCTACCCTCCTACCAGCTATTCCTCTACACAGCCGACTAGTTATGATCAGAGCAGTT
ACTCTCAGCAGAACACCTATGGGCAACCGAGCAGCTATGGACAGCAGAGTAGCTATGGTCAACAAAGCAGCTATGGGCAG
CAGCCTCCCACTAGTTACCCACCCCAAACTGGATCCTACAGCCAAGCTCCAAGTCAATATAGCCAACAGAGCAGCAGCTA
CGGGCAGCAGAGTTCATTCCGACAGGACCACCCCAGTAGCATGGGTGTTTATGGGCAGGAGTCTGGAGGATTTTCCGGAC
CAGGAGAGAACCGGAGCATGAGTGGCCCTGATAACCGGGGCAGGGGAAGAGGGGGATTTGATCGTGGAGGCATGAGCAGA
GGTGGGCGGGGAGGAGGACGCGGTGGAATGGGCGCTGGAGAGCGAGGTGGCTTCAATAAGCCTGGTGGACCCATGGATGA
AGGACCAGATCTTGATCTAGGCCCACCTGTAGATCCAGATGAAGACTCTGACAACAGTGCAATTTATGTACAAGGATTAA
ATGACAGTGTGACTCTAGATGATCTGGCAGACTTCTTTAAGCAGTGTGGGGTTGTTAAGATGAACAAGAGAACTGGGCAA
CCCATGATCCACATCTACCTGGACAAGGAAACAGGAAAGCCCAAAGGCGATGCCACAGTGTCCTATGAAGACCCACCCAC
TGCCAAGGCTGCCGTGGAATGGTTTGATGGGAAAGATTTTCAAGGGAGCAAACTTAAAGTCTCCCTTGCTCGGAAGAAGC
CTCCAATGAACAGTATGCGGGGTGGTCTGCCACCCCGTGAGGGCAGAGGCATGCCACCACCACTCCGTGGAGGTCCAGGA
GGCCCAGGAGGTCCTGGGGGACCCATGGGTCGCATGGGAGGCCGTGGAGGAGATAGAGGAGGCTTCCCTCCAAGAGGACC
CCGGGGTTCCCGAGGGAACCCCTCTGGAGGAGGAAACGTCCAGCACCGAGCTGGAGACTGGCAGTGTCCCAATCCGGGTT
GTGGAAACCAGAACTTCGCCTGGAGAACAGAGTGCAACCAGTGTAAGGCCCCAAAGCCTGAAGGCTTCCTCCCGCCACCC
TTTCCGCCCCCGGGTGGTGATCGTGGCAGAGGTGGCCCTGGTGGCATGCGGGGAGGAAGAGGTGGCCTCATGGATCGTGG
TGGTCCCGGTGGAATGTTCAGAGGTGGCCGTGGTGGAGACAGAGGTGGCTTCCGTGGTGGCCGGGGCATGGACCGAGGTG
GCTTTGGTGGAGGAAGACGAGGTGGCCCTGGGGGGCCCCCTGGACCTTTGATGGAACAGATGGGAGGAAGAAGAGGAGGA
CGTGGAGGACCTGGAAAAATGGATAAAGGCGAGCACCGTCAGGAGCGCAGAGATCGGCCCTACTAG

Library Parental gene expression (RPM)
bodymap2_adipose 137 .18 RPM
bodymap2_adrenal 298 .49 RPM
bodymap2_brain 146 .76 RPM
bodymap2_breast 124 .55 RPM
bodymap2_colon 69 .32 RPM
bodymap2_heart 88 .28 RPM
bodymap2_kidney 117 .90 RPM
bodymap2_liver 72 .88 RPM
bodymap2_lung 96 .75 RPM
bodymap2_lymph_node 144 .25 RPM
bodymap2_ovary 149 .34 RPM
bodymap2_prostate 132 .19 RPM
bodymap2_skeletal_muscle 99 .69 RPM
bodymap2_testis 179 .84 RPM
bodymap2_thyroid 202 .19 RPM
bodymap2_white_blood_cells 144 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000008298 ortholog_one2one 2 retrogenes
retro_amel_191, retro_amel_959,
Canis familiaris ENSCAFG00000012160 possible_ortholog 8 retrogenes
retro_cfam_1142, retro_cfam_1183, retro_cfam_1225, retro_cfam_133, retro_cfam_1397, retro_cfam_1736, retro_cfam_1889, retro_cfam_560,
Callithrix jacchus ENSCJAG00000019987 possible_ortholog 4 retrogenes
retro_cjac_1716, retro_cjac_2022, retro_cjac_2813, retro_cjac_2911,
Gorilla gorilla ENSGGOG00000012212 ortholog_one2one 1 retrogene
retro_ggor_444,
Macropus eugenii ENSMEUG00000008703 possible_ortholog 1 retrogene
retro_meug_1424,
Myotis lucifugus ENSMLUG00000012058 possible_ortholog 1 retrogene
retro_mluc_328,
Monodelphis domestica ENSMODG00000008679 possible_ortholog 1 retrogene
retro_mdom_279,
Oryctolagus cuniculus ENSOCUG00000004432 possible_ortholog 2 retrogenes
retro_ocun_1346, retro_ocun_242,
Pongo abelii ENSPPYG00000011684 ortholog_one2one 1 retrogene
retro_pabe_1769,
Pan troglodytes ENSPTRG00000014218 ortholog_one2one 1 retrogene
retro_ptro_350,
Ictidomys tridecemlineatus ENSSTOG00000023177 ortholog_one2one 1 retrogene
retro_itri_1892,
Tursiops truncatus ENSTTRG00000011881 ortholog_one2one 1 retrogene
retro_ttru_1366,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_463 88.89 70.17
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Download FASTA sequences of all ENSG00000182944 retrocopies