Parental gene: | HINT1, ENSAMEG00000017774 |
| Aliases: | None |
| Description: | histidine triad nucleotide binding protein 1 [Source:HGNC Symbol;Acc:4912] |
| Organism: | Panda (Ailuropoda melanoleuca) |
| Coordinates: | GL193483.1:267326..270667(-) |
>ENSAMEG00000017774
AGCTTCTCCCCGGGGCGGTCGCGCGGGAGGGTGGCCGAGATGGCAGATGAGATCGCCAAGGCTCAGGCCGCGCGGCCTGG
TGGCGACACGATCTTCGGGAAGATCATTCGCAAGGAAATCCCAGCCAAAATCATTTTTGAGGATGACCAGTGTCTTGCTT
TCCATGACATTTCCCCTCAAGCACCAACTCATTTTCTGGTGATACCCAAGAAACATATATCCCAGATTTCTGTAGCGGAA
GATGATGATGAAAGTCTTCTTGGACATTTAATGATTGTTGGCAAGAAATGTGCTGCTGATCTGGGCCTGAAGAAGGGTTA
TCGAATGGTAGTGAATGAAGGTTCAGATGGGGGACAGTCTGTCTATCATGTTCATCTCCATGTTCTTGGAGGTCGGCAGA
TGAATTGGCCTCCTGGTTAA
AGCTTCTCCCCGGGGCGGTCGCGCGGGAGGGTGGCCGAGATGGCAGATGAGATCGCCAAGGCTCAGGCCGCGCGGCCTGG
TGGCGACACGATCTTCGGGAAGATCATTCGCAAGGAAATCCCAGCCAAAATCATTTTTGAGGATGACCAGTGTCTTGCTT
TCCATGACATTTCCCCTCAAGCACCAACTCATTTTCTGGTGATACCCAAGAAACATATATCCCAGATTTCTGTAGCGGAA
GATGATGATGAAAGTCTTCTTGGACATTTAATGATTGTTGGCAAGAAATGTGCTGCTGATCTGGGCCTGAAGAAGGGTTA
TCGAATGGTAGTGAATGAAGGTTCAGATGGGGGACAGTCTGTCTATCATGTTCATCTCCATGTTCTTGGAGGTCGGCAGA
TGAATTGGCCTCCTGGTTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000010959 | ortholog_one2one | 5 retrogenes | |
| Canis familiaris | ENSCAFG00000032152 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000014398 | possible_ortholog | 3 retrogenes | |
| Echinops telfairi | ENSETEG00000010127 | possible_ortholog | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000011967 | possible_ortholog | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000005368 | ortholog_one2one | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000001091 | ortholog_one2many | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000028727 | ortholog_one2many | 3 retrogenes | |
| Mustela putorius furo | ENSMPUG00000011639 | ortholog_one2one | 4 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000006607 | possible_ortholog | 5 retrogenes | |
| Rattus norvegicus | ENSRNOG00000000622 | possible_ortholog | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000005834 | ortholog_one2many | 2 retrogenes | |
| Sus scrofa | ENSSSCG00000014264 | ortholog_one2one | 2 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000027920 | ortholog_one2many | 4 retrogenes | |
| Tursiops truncatus | ENSTTRG00000008653 | ortholog_one2one | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_amel_460 | 55.86 | 99.28 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_amel_511 | 73.33 | 95.68 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_amel_1426 | 71.54 | 88.49 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_amel_1657 | 68.54 | 62.59 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSAMEG00000017774 retrocopies