RetrogeneDB ID: | retro_shar_301 | ||
Retrocopylocation | Organism: | Tasmanian devil (Sarcophilus harrisii) | |
Coordinates: | GL841268.1:834240..834615(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSSHAG00000005834 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 68.75 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | MADEISKAQTAQ-PGGDTIFGKIIRKEIPAKIIF-EDDRCLAFHDVCPQAPTHFLVIPKKPITQISVAED |
MADEIS.AQTA...G.D.IF.KI.......KIIF.EDD..LAFHDVCP.APT.FLVIPKKPI..ISVAE. | |
Retrocopy | MADEISRAQTAP<TGRDSIFRKIFFTNLSQKIIF>EDDWHLAFHDVCP*APTQFLVIPKKPIINISVAEE |
Parental | DDENLLGHLMIVGKKCAADLGLKKGYRMVINEGADGGQSVYHIHLHVLGGRQMKWPPG |
.DEN.LGHLM.VGKKC.ADLGLK..Y..VINEG..G.Q..YHIHLHVL.G.Q...PPG | |
Retrocopy | TDEN-LGHLMVVGKKCVADLGLKRRYQIVINEGVYGVQPIYHIHLHVLRGCQRE*PPG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |