Parental gene:

HINT1, ENSSSCG00000014264

Aliases:None
Description:histidine triad nucleotide binding protein 1 [Source:HGNC Symbol;Acc:4912]
Organism:Pig (Sus scrofa)
Coordinates:2:138700891..138706953(+)


>ENSSSCG00000014264
ATGGCAGATGAGATCGCCAAGGCTCAGGCCGCCCGGCCTGGTGGCGATACGATCTTCGGGAAGATCATTCGCAAGGAAAT
CCCAGCCAAAATCATTTATGAGGATGACCAGTGTCTTGCTTTCCATGACATTTCCCCTCAAGCACCAACACATTTTCTGG
TGATACCCAAGAAACATATATCTCAGATTTCTGCAGCAGAAGATGATGATGAAAGCCTTCTTGGACATTTAATGATTGTT
GGCAAGAAATGTGCTGCTGATCTGGGCCTGAAGAAGGGTTATCGAATGGTGGTGAACGAAGGTTCAGATGGGGGACAGTC
TGTCTACCATGTTCATCTCCATGTTCTTGGAGGTCGGCAGATGAACTGGCCTCCTGGTTAA

Library Parental gene expression (RPM)
SRP014902_placenta 62 .78 RPM
SRP014902_testis 80 .20 RPM
SRP018856_adipose 126 .44 RPM
SRP018288_kidney 254 .74 RPM
SRP018288_lung 65 .98 RPM
SRP018288_liver 238 .43 RPM
SRP018288_heart 100 .69 RPM
SRP035408_liver 92 .32 RPM
SRP035408_brain 283 .78 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000017774 ortholog_one2one 4 retrogenes
retro_amel_1426, retro_amel_1657, retro_amel_460, retro_amel_511,
Bos taurus ENSBTAG00000010959 ortholog_one2one 5 retrogenes
retro_btau_1036, retro_btau_1149, retro_btau_1782, retro_btau_926, retro_btau_978,
Canis familiaris ENSCAFG00000032152 ortholog_one2many 1 retrogene
retro_cfam_473,
Callithrix jacchus ENSCJAG00000014398 possible_ortholog 3 retrogenes
retro_cjac_134, retro_cjac_142, retro_cjac_87,
Echinops telfairi ENSETEG00000010127 possible_ortholog 1 retrogene
retro_etel_1,
Gorilla gorilla ENSGGOG00000011967 possible_ortholog 1 retrogene
retro_ggor_89,
Macropus eugenii ENSMEUG00000005368 ortholog_one2one 2 retrogenes
retro_meug_1001, retro_meug_848,
Myotis lucifugus ENSMLUG00000001091 ortholog_one2many 2 retrogenes
retro_mluc_1388, retro_mluc_2100,
Monodelphis domestica ENSMODG00000028727 ortholog_one2many 3 retrogenes
retro_mdom_102, retro_mdom_1741, retro_mdom_286,
Mustela putorius furo ENSMPUG00000011639 ortholog_one2many 4 retrogenes
retro_mputfur_1337, retro_mputfur_1376, retro_mputfur_45, retro_mputfur_93,
Oryctolagus cuniculus ENSOCUG00000006607 possible_ortholog 5 retrogenes
retro_ocun_1374, retro_ocun_214, retro_ocun_643, retro_ocun_821, retro_ocun_968,
Rattus norvegicus ENSRNOG00000000622 possible_ortholog 1 retrogene
retro_rnor_98,
Sarcophilus harrisii ENSSHAG00000005834 ortholog_one2many 2 retrogenes
retro_shar_113, retro_shar_301,
Ictidomys tridecemlineatus ENSSTOG00000027920 ortholog_one2many 4 retrogenes
retro_itri_1129, retro_itri_114, retro_itri_177, retro_itri_260,
Tursiops truncatus ENSTTRG00000008653 ortholog_one2one 4 retrogenes
retro_ttru_1364, retro_ttru_1660, retro_ttru_217, retro_ttru_349,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_371 63.89 84.13
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2. retro_sscr_894 79.53 100.00
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Download FASTA sequences of all ENSSSCG00000014264 retrocopies