Parental gene:

BT.24043, ENSBTAG00000046385

Aliases:None
Description:ras-related protein Rab-5A [Source:RefSeq peptide;Acc:NP_001069654]
Organism:Cow (Bos taurus)
Coordinates:1:44747455..44754528(+)


>ENSBTAG00000046385
GCTGCTTTTCTAACTCAAACGGTATGTCTTGATGACACGACAGTAAAATTTGAAATATGGGATACGGCTGGCCAAGAGCG
GTACCACAGCCTGGCGCCCATGTACTACAGAGGCGCCCAGGCCGCCATAGTCGTGTACGACATCACGAACGAGGAGTCCT
TTGCCAGAGCCAAAAACTGGGTTAAAGAGCTTCAGAGGCAAGCCAGTCCTAACATTGTAATAGCTTTATCAGGAAACAAG
GCCGATCTGGCAAATAAAAGAGCTGTCGACTTTCAGGAGGCACAGTCCTATGCGGATGATAACAGTTTATTATTTATGGA
GACATCAGCTAAAACATCAATGAATGTAAATGAAATATTCATGGCAATAGCTAAAAAGTTGCCAAAGAATGAACCACAGA
ATCCAGGAGCAAATTCTACCAGAGGAAGAGGAGTAGACCTCACCGAGCCCACACAGCCCACCAGGAGTCAGTGCTGTAGT
AACTAA

Library Parental gene expression (RPM)
SRP017611_brain 51 .43 RPM
SRP017611_kidney 29 .87 RPM
SRP017611_liver 20 .92 RPM
ERP005899_muscle 18 .79 RPM
ERP005899_liver 23 .29 RPM
SRP030211_testis 33 .96 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000000954 ortholog_one2one 1 retrogene
retro_amel_958,
Callithrix jacchus ENSCJAG00000003731 ortholog_one2many 1 retrogene
retro_cjac_3268,
Cavia porcellus ENSCPOG00000005322 ortholog_one2one 2 retrogenes
retro_cpor_1213, retro_cpor_219,
Dipodomys ordii ENSDORG00000012429 ortholog_one2one 1 retrogene
retro_dord_288,
Felis catus ENSFCAG00000004455 ortholog_one2one 2 retrogenes
retro_fcat_1349, retro_fcat_984,
Homo sapiens ENSG00000144566 ortholog_one2one 1 retrogene
retro_hsap_1074,
Gorilla gorilla ENSGGOG00000015981 ortholog_one2one 1 retrogene
retro_ggor_848,
Loxodonta africana ENSLAFG00000008321 ortholog_one2one 1 retrogene
retro_lafr_267,
Macaca mulatta ENSMMUG00000006992 ortholog_one2many 2 retrogenes
retro_mmul_227, retro_mmul_839,
Monodelphis domestica ENSMODG00000014793 ortholog_one2one 2 retrogenes
retro_mdom_1219, retro_mdom_1993,
Mus musculus ENSMUSG00000017831 ortholog_one2one 1 retrogene
retro_mmus_1645,
Nomascus leucogenys ENSNLEG00000003434 ortholog_one2one 1 retrogene
retro_nleu_2466,
Oryctolagus cuniculus ENSOCUG00000012200 ortholog_one2one 1 retrogene
retro_ocun_1034,
Pongo abelii ENSPPYG00000014074 ortholog_one2one 2 retrogenes
retro_pabe_3094, retro_pabe_894,
Pan troglodytes ENSPTRG00000014682 ortholog_one2one 1 retrogene
retro_ptro_731,
Ictidomys tridecemlineatus ENSSTOG00000026229 ortholog_one2one 1 retrogene
retro_itri_398,
Tarsius syrichta ENSTSYG00000007642 ortholog_one2one 3 retrogenes
retro_tsyr_1544, retro_tsyr_315, retro_tsyr_946,
Tursiops truncatus ENSTTRG00000001374 ortholog_one2one 1 retrogene
retro_ttru_949,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_300 61.39 62.73
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Download FASTA sequences of all ENSBTAG00000046385 retrocopies