Parental gene:

RAB5A, ENSG00000144566

Aliases:RAB5A, RAB5
Description:RAB5A, member RAS oncogene family [Source:HGNC Symbol;Acc:9783]
Organism:Human (Homo sapiens)
Coordinates:3:19988570..20026667(+)


>ENSG00000144566
ATGGCTAGTCGAGGCGCAACAAGACCCAACGGGCCAAATACGGGAAATAAAATATGCCAGTTCAAACTAGTACTTCTGGG
AGAGTCCGCTGTTGGCAAATCAAGCCTAGTGCTTCGTTTTGTGAAAGGCCAATTTCATGAATTTCAAGAGAGTACCATTG
GGGCTGCTTTTCTAACCCAAACTGTATGTCTTGATGACACTACAGTAAAGTTTGAAATATGGGATACAGCTGGTCAAGAA
CGATACCATAGCCTAGCACCAATGTACTACAGAGGAGCACAAGCAGCCATAGTTGTATATGATATCACAAATGAGGAGTC
CTTTGCAAGAGCAAAAAATTGGGTTAAAGAACTTCAGAGGCAAGCAAGTCCTAACATTGTAATAGCTTTATCGGGAAACA
AGGCCGACCTAGCAAATAAAAGAGCAGTAGATTTCCAGGAAGCACAGTCCTATGCAGATGACAATAGTTTATTATTCATG
GAGACATCCGCTAAAACATCAATGAATGTAAATGAAATATTCATGGCAATAGCTAAAAAATTGCCAAAGAATGAACCACA
AAATCCAGGAGCAAATTCTGCCAGAGGAAGAGGAGTAGACCTTACCGAACCCACACAACCAACCAGGAATCAGTGTTGTA
GTAACTAA

Library Parental gene expression (RPM)
bodymap2_liver 39 .10 RPM
bodymap2_lung 111 .16 RPM
bodymap2_breast 85 .58 RPM
bodymap2_adipose 83 .19 RPM
bodymap2_adrenal 73 .22 RPM
bodymap2_skeletal_muscle 39 .38 RPM
bodymap2_thyroid 101 .35 RPM
bodymap2_prostate 86 .34 RPM
bodymap2_colon 78 .12 RPM
bodymap2_testis 68 .40 RPM
bodymap2_brain 129 .93 RPM
bodymap2_heart 56 .80 RPM
bodymap2_white_blood_cells 71 .86 RPM
bodymap2_lymph_node 58 .62 RPM
bodymap2_ovary 64 .37 RPM
bodymap2_kidney 76 .02 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000000954 ortholog_one2one 1 retrogene
retro_amel_958,
Bos taurus ENSBTAG00000046385 ortholog_one2one 1 retrogene
retro_btau_300,
Callithrix jacchus ENSCJAG00000003731 ortholog_one2many 1 retrogene
retro_cjac_3268,
Cavia porcellus ENSCPOG00000005322 ortholog_one2one 2 retrogenes
retro_cpor_1213, retro_cpor_219,
Dipodomys ordii ENSDORG00000012429 ortholog_one2one 1 retrogene
retro_dord_288,
Felis catus ENSFCAG00000004455 ortholog_one2one 2 retrogenes
retro_fcat_1349, retro_fcat_984,
Gorilla gorilla ENSGGOG00000015981 ortholog_one2one 1 retrogene
retro_ggor_848,
Loxodonta africana ENSLAFG00000008321 ortholog_one2one 1 retrogene
retro_lafr_267,
Macaca mulatta ENSMMUG00000006992 ortholog_one2many 2 retrogenes
retro_mmul_227, retro_mmul_839,
Monodelphis domestica ENSMODG00000014793 ortholog_one2one 2 retrogenes
retro_mdom_1219, retro_mdom_1993,
Mus musculus ENSMUSG00000017831 ortholog_one2one 1 retrogene
retro_mmus_1645,
Nomascus leucogenys ENSNLEG00000003434 ortholog_one2one 1 retrogene
retro_nleu_2466,
Oryctolagus cuniculus ENSOCUG00000012200 ortholog_one2one 1 retrogene
retro_ocun_1034,
Pongo abelii ENSPPYG00000014074 ortholog_one2one 2 retrogenes
retro_pabe_3094, retro_pabe_894,
Pan troglodytes ENSPTRG00000014682 ortholog_one2one 1 retrogene
retro_ptro_731,
Ictidomys tridecemlineatus ENSSTOG00000026229 ortholog_one2one 1 retrogene
retro_itri_398,
Tarsius syrichta ENSTSYG00000007642 ortholog_one2one 3 retrogenes
retro_tsyr_1544, retro_tsyr_315, retro_tsyr_946,
Tursiops truncatus ENSTTRG00000001374 ortholog_one2one 1 retrogene
retro_ttru_949,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_1074 86.67 76.28
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Download FASTA sequences of all ENSG00000144566 retrocopies