Parental gene: | RAB5A, ENSTSYG00000007642 |
| Aliases: | None |
| Description: | RAB5A, member RAS oncogene family [Source:HGNC Symbol;Acc:9783] |
| Organism: | Tarsier (Tarsius syrichta) |
| Coordinates: | GeneScaffold_4483:489..27396(+) |
>ENSTSYG00000007642
ATGGCTAGTCGAGGAGCAACGAGACCCAACGGGCCCAATACTGGAAATAAGATATGCCAGTTCAAACTAGTGCTTCTGGG
CGAGTCCGCTGTCGGCAAGTCGAGCCTGGTGCTTCGCTTTGTGAAAGGCCAGTTTCATGAGTTTCAAGAGAGTACCATTG
GGGCTGCTTTTCTAACCCAAACTGTGTGTCTTGATGACACTACAGTAAAGTTTGAAATCTGGGATACAGCTGGCCAAGAA
CGATACCATAGCCTAGCCCCAATGTATTACAGAGGAGCGCAAGCCGCCATAGTTGTGTATGATATCACAAATGAGGAGTC
CTTTGCAAGAGCAAAAAATTGGGTTAAAGAACTTCAGAGGCAAGCAAGTCCTAACATTGTAATAGCTTTATCAGGAAACA
AGGCTGACCTAGCAAATAAAAGAGCTGTAGACTTCCAGGAAGCACAGTCCTATGCAGATGACAACAGTTTATTATTCATG
GAGACGTCAGCTAAAACATCAATGAATGTAAATGAAATATTCATGGCAATAGCTAAAAAATTGCCCAAGAATGAACCACA
GAATCCAGGAGCAAATTCTGCCAGAGGAAGAGGAGTAGACCTTACTGAACCCACACAACCGACCAGGAGTCAGTGTTGTA
GTAACTAG
ATGGCTAGTCGAGGAGCAACGAGACCCAACGGGCCCAATACTGGAAATAAGATATGCCAGTTCAAACTAGTGCTTCTGGG
CGAGTCCGCTGTCGGCAAGTCGAGCCTGGTGCTTCGCTTTGTGAAAGGCCAGTTTCATGAGTTTCAAGAGAGTACCATTG
GGGCTGCTTTTCTAACCCAAACTGTGTGTCTTGATGACACTACAGTAAAGTTTGAAATCTGGGATACAGCTGGCCAAGAA
CGATACCATAGCCTAGCCCCAATGTATTACAGAGGAGCGCAAGCCGCCATAGTTGTGTATGATATCACAAATGAGGAGTC
CTTTGCAAGAGCAAAAAATTGGGTTAAAGAACTTCAGAGGCAAGCAAGTCCTAACATTGTAATAGCTTTATCAGGAAACA
AGGCTGACCTAGCAAATAAAAGAGCTGTAGACTTCCAGGAAGCACAGTCCTATGCAGATGACAACAGTTTATTATTCATG
GAGACGTCAGCTAAAACATCAATGAATGTAAATGAAATATTCATGGCAATAGCTAAAAAATTGCCCAAGAATGAACCACA
GAATCCAGGAGCAAATTCTGCCAGAGGAAGAGGAGTAGACCTTACTGAACCCACACAACCGACCAGGAGTCAGTGTTGTA
GTAACTAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000000954 | ortholog_one2one | 1 retrogene | |
| Bos taurus | ENSBTAG00000046385 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000003731 | ortholog_one2many | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000005322 | ortholog_one2one | 2 retrogenes | |
| Dipodomys ordii | ENSDORG00000012429 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000004455 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000144566 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000015981 | ortholog_one2one | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000008321 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000006992 | ortholog_one2many | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000014793 | ortholog_one2one | 2 retrogenes | |
| Mus musculus | ENSMUSG00000017831 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000003434 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000012200 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000014074 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000014682 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000026229 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000001374 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_tsyr_315 | 73.30 | 95.35 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_tsyr_946 | 96.76 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_tsyr_1544 | 69.34 | 61.40 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSTSYG00000007642 retrocopies