Parental gene:

Rps18, ENSDORG00000013825

Aliases:None
Description:ribosomal protein S18 [Source:MGI Symbol;Acc:MGI:98146]
Organism:Kangaroo rat (Dipodomys ordii)
Coordinates:GeneScaffold_6602:85358..89890(+)


>ENSDORG00000013825
ATGTCTTTAGTGATTCCTGAGAAGTTCCAGCACATTTTGCGAGTACTCAACACCAACATCGATGGGCGGCGGAAAATAGC
CTTTGCCATCACTGCCATTAAGGGTGTGGGGCGAAGATACGCTCATGTGGTGTTGAGGAAAGCAGACATTGACCTTACCA
AGAGGGCTGGAGAACTCACAGAGGATGAGGTGGAACGTGTGATCACCATTATGCAGAATCCACGTCAGTACAAGATTCCA
GACTGGTTCTTAAACAGACAGAAGGATGTAAAGGATGGAAAATACAGCCAGGTTTTGGCCAATGGTCTGGATAATAAGCT
CCGTGAAGACCTGGAGCGGCTGAAGAAGATTCGAGCCCATAGAGGGCTGCGCCACTTCTGGGGCCTTCGAGTTAGAGGCC
AACACACCAAGACCACTGGACGCCGTGGTCGCACTGTGGGTGTGTCCAAGAAGAAATGA

Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000000950 ortholog_one2one 7 retrogenes
retro_cfam_1311, retro_cfam_1607, retro_cfam_2132, retro_cfam_414, retro_cfam_522, retro_cfam_789, retro_cfam_856,
Gorilla gorilla ENSGGOG00000006571 possible_ortholog 5 retrogenes
retro_ggor_1496, retro_ggor_2310, retro_ggor_344, retro_ggor_77, retro_ggor_93,
Loxodonta africana ENSLAFG00000032173 possible_ortholog 1 retrogene
retro_lafr_1171,
Macaca mulatta ENSMMUG00000003867 possible_ortholog 1 retrogene
retro_mmul_2198,
Mus musculus ENSMUSG00000008668 ortholog_one2one 2 retrogenes
retro_mmus_57, retro_mmus_66,
Nomascus leucogenys ENSNLEG00000006840 ortholog_one2one 10 retrogenes
retro_nleu_1074, retro_nleu_1161, retro_nleu_1176, retro_nleu_1466, retro_nleu_219, retro_nleu_2572, retro_nleu_2616, retro_nleu_525, retro_nleu_60, retro_nleu_737,
Oryctolagus cuniculus ENSOCUG00000010546 possible_ortholog 1 retrogene
retro_ocun_31,
Procavia capensis ENSPCAG00000005854 ortholog_one2one 2 retrogenes
retro_pcap_235, retro_pcap_319,
Pongo abelii ENSPPYG00000025953 possible_ortholog 14 retrogenes
retro_pabe_1138, retro_pabe_128, retro_pabe_1481, retro_pabe_1482, retro_pabe_1813, retro_pabe_1881, retro_pabe_2303, retro_pabe_2407, retro_pabe_2663, retro_pabe_2833, retro_pabe_2967, retro_pabe_3013, retro_pabe_3070, retro_pabe_368,
Pan troglodytes ENSPTRG00000018039 possible_ortholog 1 retrogene
retro_ptro_121,
Rattus norvegicus ENSRNOG00000028505 ortholog_one2one 4 retrogenes
retro_rnor_102, retro_rnor_234, retro_rnor_29, retro_rnor_70,
Sarcophilus harrisii ENSSHAG00000006857 ortholog_one2one 2 retrogenes
retro_shar_265, retro_shar_563,
Sarcophilus harrisii ENSSHAG00000008658 possible_ortholog 1 retrogene
retro_shar_618,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dord_50 83.12 100.00
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2. retro_dord_185 83.33 90.79
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3. retro_dord_326 83.33 65.79
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4. retro_dord_426 98.68 100.00
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5. retro_dord_481 67.37 62.50
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6. retro_dord_772 80.88 88.82
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Download FASTA sequences of all ENSDORG00000013825 retrocopies