Parental gene: | FABP5, ENSG00000164687 |
| Aliases: | FABP5, E-FABP, EFABP, KFABP, PA-FABP, PAFABP |
| Description: | fatty acid binding protein 5 (psoriasis-associated) [Source:HGNC Symbol;Acc:3560] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 8:82192597..82197012(+) |
>ENSG00000164687
ATGGCCACAGTTCAGCAGCTGGAAGGAAGATGGCGCCTGGTGGACAGCAAAGGCTTTGATGAATACATGAAGGAGCTAGG
AGTGGGAATAGCTTTGCGAAAAATGGGCGCAATGGCCAAGCCAGATTGTATCATCACTTGTGATGGTAAAAACCTCACCA
TAAAAACTGAGAGCACTTTGAAAACAACACAGTTTTCTTGTACCCTGGGAGAGAAGTTTGAAGAAACCACAGCTGATGGC
AGAAAAACTCAGACTGTCTGCAACTTTACAGATGGTGCATTGGTTCAGCATCAGGAGTGGGATGGGAAGGAAAGCACAAT
AACAAGAAAATTGAAAGATGGGAAATTAGTGGTGGAGTGTGTCATGAACAATGTCACCTGTACTCGGATCTATGAAAAAG
TAGAATAA
ATGGCCACAGTTCAGCAGCTGGAAGGAAGATGGCGCCTGGTGGACAGCAAAGGCTTTGATGAATACATGAAGGAGCTAGG
AGTGGGAATAGCTTTGCGAAAAATGGGCGCAATGGCCAAGCCAGATTGTATCATCACTTGTGATGGTAAAAACCTCACCA
TAAAAACTGAGAGCACTTTGAAAACAACACAGTTTTCTTGTACCCTGGGAGAGAAGTTTGAAGAAACCACAGCTGATGGC
AGAAAAACTCAGACTGTCTGCAACTTTACAGATGGTGCATTGGTTCAGCATCAGGAGTGGGATGGGAAGGAAAGCACAAT
AACAAGAAAATTGAAAGATGGGAAATTAGTGGTGGAGTGTGTCATGAACAATGTCACCTGTACTCGGATCTATGAAAAAG
TAGAATAA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 0 .42 RPM |
| bodymap2_lung | 14 .24 RPM |
| bodymap2_breast | 44 .65 RPM |
| bodymap2_adipose | 19 .10 RPM |
| bodymap2_adrenal | 30 .15 RPM |
| bodymap2_skeletal_muscle | 3 .60 RPM |
| bodymap2_thyroid | 7 .38 RPM |
| bodymap2_prostate | 21 .62 RPM |
| bodymap2_colon | 21 .44 RPM |
| bodymap2_testis | 11 .88 RPM |
| bodymap2_brain | 20 .77 RPM |
| bodymap2_heart | 14 .62 RPM |
| bodymap2_white_blood_cells | 1 .16 RPM |
| bodymap2_lymph_node | 31 .58 RPM |
| bodymap2_ovary | 4 .59 RPM |
| bodymap2_kidney | 2 .48 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000014619 | ortholog_one2many | 1 retrogene | |
| Bos taurus | ENSBTAG00000047330 | ortholog_one2one | 3 retrogenes | |
| Callithrix jacchus | ENSCJAG00000000444 | ortholog_one2one | 4 retrogenes | |
| Cavia porcellus | ENSCPOG00000025732 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000018066 | ortholog_one2one | 5 retrogenes | |
| Equus caballus | ENSECAG00000008270 | ortholog_one2one | 2 retrogenes | |
| Erinaceus europaeus | ENSEEUG00000014023 | ortholog_one2one | 2 retrogenes | |
| Echinops telfairi | ENSETEG00000007443 | ortholog_one2one | 14 retrogenes | |
| Felis catus | ENSFCAG00000006032 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000121769 | within_species_paralog | 1 retrogene | |
| Homo sapiens | ENSG00000164434 | within_species_paralog | 1 retrogene | |
| Homo sapiens | ENSG00000197416 | within_species_paralog | 1 retrogene | |
| Latimeria chalumnae | ENSLACG00000008511 | ortholog_many2many | 3 retrogenes | |
| Macropus eugenii | ENSMEUG00000002136 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000001311 | ortholog_one2one | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000009514 | ortholog_one2one | 3 retrogenes | |
| Macaca mulatta | ENSMMUG00000000486 | ortholog_one2many | 4 retrogenes | |
| Mus musculus | ENSMUSG00000027533 | ortholog_one2one | 4 retrogenes | |
| Otolemur garnettii | ENSOGAG00000002413 | ortholog_one2one | 10 retrogenes | |
| Oryzias latipes | ENSORLG00000008282 | ortholog_many2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000018699 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000020373 | ortholog_one2one | 12 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000017850 | ortholog_one2one | 5 retrogenes | |
| Rattus norvegicus | ENSRNOG00000049075 | ortholog_one2one | 3 retrogenes | |
| Sus scrofa | ENSSSCG00000006153 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000007877 | ortholog_one2many | 3 retrogenes | |
| Tarsius syrichta | ENSTSYG00000001472 | ortholog_one2one | 5 retrogenes | |
| Tursiops truncatus | ENSTTRG00000005377 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_880 | 100.00 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_hsap_1205 | 95.56 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_hsap_1279 | 97.04 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_hsap_1520 | 91.18 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_hsap_1521 | 93.33 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_hsap_2167 | 91.96 | 82.96 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_hsap_2568 | 91.18 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_hsap_3000 | 78.91 | 94.81 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_hsap_3357 | 76.83 | 60.74 | Please wait, loading | Please wait, loading | Please wait, loading |
| 10. | retro_hsap_3376 | 61.86 | 85.93 | Please wait, loading | Please wait, loading | Please wait, loading |
| 11. | retro_hsap_3811 | 91.85 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 12. | retro_hsap_4717 | 66.20 | 52.59 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000164687 retrocopies