Parental gene:

KATNBL1, ENSOPRG00000010379

Aliases:None
Description:katanin p80 subunit B-like 1 [Source:HGNC Symbol;Acc:26199]
Organism:Southern American pika (Ochotona princeps)
Coordinates:GeneScaffold_2123:13037..24405(-)


>ENSOPRG00000010379
ACAGTTGGACAAGCTGTGAAAAACCCAGACAAACTACGTAAGGTGATCTATCGCAGAAAGAAAGTTCATCATCCCTTTCC
AGATCCTTGTTACAGAAAAAAACAGTCCCCTAGCAGTGGGGGCTGTGACATGGCAAATAAAGAAAATGAACTGGCTTGTG
CAGGCCACCTGCCCGAAAAGTTACGTCATGATAGTCGAACATATTTGATTAATTCCAGCGACTCTGGTTCTTCACAGACA
GAAAGCCCATCATCAAAATATAGTGGGTTCTTTTCTGAGGTTTCTCAGGACCATGAAACAATGGCCCAAGTTTTATTCAG
CAGGAATTTGAGATTGAATGTAGCTTTAACTTTTTGGAGGAAGCGAAGTATAAGTGAACTTGTAGCCTATTTGGTGAGGA
TAGAAGATCTGGGAGTTGTAGTAGATTGCCTTCCTGTGCTCACCAATAGTTTACAGGAAGAAAAACACTATATCTCACTT
GGCTGCTGTGTGGATTTGTTGCCCCTAGTAAAGTCATTACTTAAAAGCAGATTCGAAGANNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAATATTCAAA
TTTTGAAACAACAATTAAGTGGATTATGGGAACAGGAAAACCATCTTACTTTGGTTCCAGGATATACTGGTAATATAGCT
AAGGATGTAGATGCTTATTTATTACAGTTGCATTGA

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000006413 ortholog_one2one 2 retrogenes
Callithrix jacchus ENSCJAG00000021110 ortholog_one2many 3 retrogenes
Cavia porcellus ENSCPOG00000011153 ortholog_one2one 2 retrogenes
Dasypus novemcinctus ENSDNOG00000016279 ortholog_one2one 5 retrogenes
Dipodomys ordii ENSDORG00000013172 ortholog_one2one 2 retrogenes
Equus caballus ENSECAG00000023450 ortholog_one2one 1 retrogene
Echinops telfairi ENSETEG00000001640 ortholog_one2one 7 retrogenes
Homo sapiens ENSG00000134152 ortholog_one2one 3 retrogenes
Gorilla gorilla ENSGGOG00000014230 ortholog_one2one 3 retrogenes
Macropus eugenii ENSMEUG00000015610 ortholog_one2one 4 retrogenes
Myotis lucifugus ENSMLUG00000001532 ortholog_one2many 2 retrogenes
Macaca mulatta ENSMMUG00000000013 ortholog_one2one 1 retrogene
Mustela putorius furo ENSMPUG00000008019 ortholog_one2one 1 retrogene
Nomascus leucogenys ENSNLEG00000010772 ortholog_one2one 2 retrogenes
Oryctolagus cuniculus ENSOCUG00000017654 ortholog_one2one 5 retrogenes
Otolemur garnettii ENSOGAG00000015633 ortholog_one2one 3 retrogenes
Pongo abelii ENSPPYG00000006309 ortholog_one2one 2 retrogenes
Pan troglodytes ENSPTRG00000006877 ortholog_one2one 3 retrogenes
Sorex araneus ENSSARG00000007891 ortholog_one2one 1 retrogene
Ictidomys tridecemlineatus ENSSTOG00000003813 ortholog_one2one 1 retrogene
Tupaia belangeri ENSTBEG00000001614 ortholog_one2one 7 retrogenes
Tarsius syrichta ENSTSYG00000011059 ortholog_one2one 1 retrogene
Vicugna pacos ENSVPAG00000007170 ortholog_one2one 1 retrogene

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_opri_446 69.23 71.31
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Download FASTA sequences of all ENSOPRG00000010379 retrocopies