Parental gene:

NACA, ENSPVAG00000008015

Aliases:None
Description:nascent polypeptide-associated complex alpha subunit [Source:HGNC Symbol;Acc:7629]
Organism:Megabat (Pteropus vampyrus)
Coordinates:scaffold_12223:7613..17785(-)


>ENSPVAG00000008015
ATGCCTGGTGAAGCCACAGAAACCGTCCCTGCTACAGAGCAGGAGTTGCCACAGCCCCAAGCTGAGACAGGGTCTGGAAC
AGAATCTGACAGTGATGAATCAGTGCCAGAGCTTGAGGAACAAGATTCCACACAGGCAACCACACAACAAGCCCTGGCAG
CAGCAGCTGAAATCGATGAAGAACCTGTCAGTAAAGCTAAACAGAGCCGGAGTGAAAAGAAGGCACGGAAGGCTATGTCC
AAACTGGGTCTTCGACAGGTTACAGGGGTTACTAGGGTCACTATCCGAAAATCTAAGAATATCCTTTTTGTCATCACAAA
ACCAGATGTCTACAAGAGCCCAGCTTCAGATACCTATATAGTTTTTGGAGAAGCCAAGATCGAGGATTTATCTCAGCAAG
CACAGCTAGCAGCTGCTGAGAAATTTAAAGTTCAAGGTGAAACTGTCTCAAACATTCAAGAAAACACACAGACTCCAACT
GTACAAGAGGAGAGCGAAGAGGAAGAGGTTGATGAAACAGGTGTGGAAGTTAAGGACATAGAATTGGTCATGTCACAAGC
AAATGTGTCGAGAGCGAAGGCAGTCCGCGCCCTGAAGAACAACAGTAATGATATTGTAAATGCTATTATGGAATTAACAA
TGTAA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000004175 possible_ortholog 3 retrogenes
retro_amel_1725, retro_amel_1821, retro_amel_643,
Canis familiaris ENSCAFG00000000141 possible_ortholog 8 retrogenes
retro_cfam_1502, retro_cfam_1561, retro_cfam_1884, retro_cfam_1913, retro_cfam_2096, retro_cfam_2169, retro_cfam_710, retro_cfam_974,
Callithrix jacchus ENSCJAG00000010701 ortholog_one2one 8 retrogenes
retro_cjac_1063, retro_cjac_1452, retro_cjac_1875, retro_cjac_2202, retro_cjac_2453, retro_cjac_2696, retro_cjac_2975, retro_cjac_3232,
Cavia porcellus ENSCPOG00000012654 ortholog_one2one 3 retrogenes
retro_cpor_1025, retro_cpor_1365, retro_cpor_617,
Loxodonta africana ENSLAFG00000004598 possible_ortholog 6 retrogenes
retro_lafr_1107, retro_lafr_113, retro_lafr_1251, retro_lafr_166, retro_lafr_491, retro_lafr_958,
Myotis lucifugus ENSMLUG00000001169 possible_ortholog 16 retrogenes
retro_mluc_1147, retro_mluc_1653, retro_mluc_1668, retro_mluc_1756, retro_mluc_1767, retro_mluc_1851, retro_mluc_1881, retro_mluc_1941, retro_mluc_2587, retro_mluc_2600, retro_mluc_414, retro_mluc_492, retro_mluc_526, retro_mluc_641, retro_mluc_725, retro_mluc_861,
Vicugna pacos ENSVPAG00000004028 possible_ortholog 2 retrogenes
retro_vpac_485, retro_vpac_611,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pvam_290 74.77 51.40
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2. retro_pvam_580 82.03 100.00
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3. retro_pvam_1007 75.35 100.00
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4. retro_pvam_1097 70.64 100.00
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5. retro_pvam_1154 78.63 54.67
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6. retro_pvam_1173 79.37 86.45
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7. retro_pvam_1382 74.19 99.07
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8. retro_pvam_1384 80.45 99.53
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Download FASTA sequences of all ENSPVAG00000008015 retrocopies