RetrogeneDB ID: | retro_mluc_2600 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL431453:2976..3612(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSMLUG00000004364 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSMLUG00000001169 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 69.09 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 5 |
Parental | MPGEATETVPATEQELPQPQAETGSGTESDSDESVPELEEQDSTQATTQQAQLAAAAEIDEEPV-SKAKQ |
MPGEA.ETVPATEQ.LPQPQAETGSG....SD......E......A.....Q...AA....E...S.... | |
Retrocopy | MPGEAAETVPATEQGLPQPQAETGSG--AESDSDESGPELGEQDSAQATTQQAPLAAAGIDEEP>SAKQN |
Parental | SRSEKKARKAMSKLGLRQVTGVTRVTI-RKSKNILFVITKPDVYKSPAS-DTYIVFG-EAKIEDLSQQAQ |
SRS.KKARKA.SKLGLRQVTGVTRVTI.RK.KN.LFV.TKPDVYKSPAS.DTYIV.G.EAKIEDL.QQAQ | |
Retrocopy | SRSGKKARKAVSKLGLRQVTGVTRVTI<RKPKNSLFVLTKPDVYKSPAS<DTYIVWG<EAKIEDLAQQAQ |
Parental | LAAAEKFKVQGEAVSNIQENTQTP-TVQEESEEEEVDETGVEVKDIELVMSQANVSRAKAVRALKNNSND |
.AAAEKFKVQGEAVSNIQ.NTQ.P.TVQEESEEEE..ETGVEV..IEL..SQANV.RAKAV.ALK..S.. | |
Retrocopy | PAAAEKFKVQGEAVSNIQGNTQAP<TVQEESEEEEAGETGVEVGHIELAVSQANVWRAKAV*ALKSSSHG |
Parental | IVNAIMELTM |
..NA.ME..M | |
Retrocopy | TANAVMESAM |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |