RetrogeneDB ID: | retro_mluc_1147 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429799:5958820..5959428(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSMLUG00000029204 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSMLUG00000001169 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 71.77 % |
Parental protein coverage: | 94.88 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 5 |
Parental | TEQELPQPQAE-TGSGTESDSDESVPELEEQDSTQATTQQAQLAAAAEIDEEPVSKAKQSR-SEKKARKA |
TEQ..PQPQA...GSG.ESD.D..V.EL.EQD.TQATT..A.LAAAAEI.E..VSK.KQS..SEKK.R.A | |
Retrocopy | TEQVSPQPQAN<SGSGAESDNDGTVSELQEQDFTQATT*-ASLAAAAEINEKAVSKEKQSG<SEKKTREA |
Parental | MSKLGLRQVTGVTRVTIR-KSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFKVQGE |
MSKLGL...TGVT..T...KSKNILF.ITKPDV.KS.ASDTY.VFGE.KI..LS.QAQL.A.EKFKVQGE | |
Retrocopy | MSKLGLQWGTGVTKITNL>KSKNILFIITKPDVHKSSASDTYVVFGEVKIVNLS*QAQLTATEKFKVQGE |
Parental | AVSNIQENTQTPTVQEESEEEEVDETGVEVKDIELVMSQ-ANVSRAKAVRALKNNSNDIV-NAIMELTM |
.VSN...N..TPTVQEESEE.E.DETGVEVKDIEL.MSQ..NV..AK.V.ALKNNSNDIV.NA..ELTM | |
Retrocopy | TVSNVKQNNLTPTVQEESEEKEDDETGVEVKDIELIMSQ>RNVLTAKTVPALKNNSNDIV<NAVIELTM |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |