RetrogeneDB ID: | retro_amel_1821 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL194610.1:73530..73997(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSAMEG00000004175 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 74.38 % |
Parental protein coverage: | 73.95 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 1 |
Parental | MPGEATETVPATEQELPQPQAETGSGTESDSDES-VPELEEQDSTQATTQQAQLAAAAEIDEEPVSKAKQ |
M.GEATET.PATE.ELP..QAE.G.G.E.DSDES..PEL.EQDSTQATTQQAQLAAAAEIDEEPV.KA.. | |
Retrocopy | MHGEATETIPATE*ELPHFQAEPGFGPEYDSDES<IPELKEQDSTQATTQQAQLAAAAEIDEEPVRKAIT |
Parental | SRSEKKARKAMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAA |
....K.....MSKLG..Q...V.RVT..K..NILFVITKPDVYK..ASDTYIV.GE.K.EDLSQQAQLAA | |
Retrocopy | ELE*KEGMEGMSKLGRQQ---VMRVTM*KLENILFVITKPDVYKIQASDTYIVLGEPKMEDLSQQAQLAA |
Parental | AEKFKVQGEAVSNIQENTQT |
AEKF.V.GEAVSNIQENTQT | |
Retrocopy | AEKFEVKGEAVSNIQENTQT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |