RetrogeneDB ID: | retro_amel_542 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL192494.1:221094..221502(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSAMEG00000010692 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 69.01 % |
Parental protein coverage: | 97.18 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 4 |
Parental | AAAGGPGAP-LSPDELLPKGDSEKTEEELEEEDDEELDETLSERLWGLTEMFPERVRSAAGATFDLS-LF |
A..G.PG...LSPDEL..KGD..KTEE.L.EED.EELDE.L.ERL.GLTE.FPERV.S.AGA.FDLS..F | |
Retrocopy | ATTGSPGTS<LSPDELPLKGDAKKTEE-LDEEDGEELDEILLERLGGLTELFPERVLSGAGAAFDLS>VF |
Parental | VAQKMYRFSRAALWIGTTSFMILVLPVVFETEKLQMEQQQQLQQRQIL-LGPNTGLSGGM-PGALPSLPG |
VAQK..RF.RAALWIGTT.FMI.VLP.V.E.EKLQME.QQ.L.Q.Q.L..GP..G.SGG...GA.PSLPG | |
Retrocopy | VAQKLCRFPRAALWIGTTFFMIPVLPLVLEPEKLQME-QQRLRQGQVL>AGPDIGFSGGV<VGAPPSLPG |
Parental | KI |
KI | |
Retrocopy | KI |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |