Parental gene: | TOMM22, ENSPPYG00000011825 |
| Aliases: | None |
| Description: | translocase of outer mitochondrial membrane 22 homolog (yeast) [Source:HGNC Symbol;Acc:18002] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 22:33875755..33879310(+) |
>ENSPPYG00000011825
ATGGCTGCCGCCGTCGCTGCTGCCGGTGCAGGGGAACCCCAGTCCCCGGACGAATTGCTCCCGAAAGGCGACGCGGAGAA
GCCTGAGGAGGAGCTGGAGGAGGACGACGATGAGGAGCTAGATGAGACCCTGTCGGAGAGACTATGGGGCCTGACGGAGA
TGTTTCCGGAGAGAGTCCGGTCCGCGGCCGGAGCCACTTTTGATCTTTCCCTCTTTGTGGCTCAGAAAATGTACAGGTTT
TCCAGGGCAGCCTTGTGGATTGGGACCACTTCCTTTATGATCCTGGTTCTTCCCGTTGTCTTTGAGACTGAGAAGTTGCA
AATGGAGCAACAGCAGCAACTGCAGCAGCGGCAGATACTTCTAGGGCCTAACACAGGGCTCTCAGGAGGAATGCCAGGGG
CTCTACCCTCACTTCCTGGAAAGATCTAG
ATGGCTGCCGCCGTCGCTGCTGCCGGTGCAGGGGAACCCCAGTCCCCGGACGAATTGCTCCCGAAAGGCGACGCGGAGAA
GCCTGAGGAGGAGCTGGAGGAGGACGACGATGAGGAGCTAGATGAGACCCTGTCGGAGAGACTATGGGGCCTGACGGAGA
TGTTTCCGGAGAGAGTCCGGTCCGCGGCCGGAGCCACTTTTGATCTTTCCCTCTTTGTGGCTCAGAAAATGTACAGGTTT
TCCAGGGCAGCCTTGTGGATTGGGACCACTTCCTTTATGATCCTGGTTCTTCCCGTTGTCTTTGAGACTGAGAAGTTGCA
AATGGAGCAACAGCAGCAACTGCAGCAGCGGCAGATACTTCTAGGGCCTAACACAGGGCTCTCAGGAGGAATGCCAGGGG
CTCTACCCTCACTTCCTGGAAAGATCTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 24 .44 RPM |
| SRP007412_cerebellum | 15 .69 RPM |
| SRP007412_heart | 17 .01 RPM |
| SRP007412_kidney | 29 .14 RPM |
| SRP007412_liver | 22 .71 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000010692 | ortholog_one2many | 3 retrogenes | |
| Canis familiaris | ENSCAFG00000001383 | ortholog_one2many | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000011731 | ortholog_one2many | 5 retrogenes | |
| Cavia porcellus | ENSCPOG00000005963 | ortholog_one2one | 1 retrogene | |
| Equus caballus | ENSECAG00000010359 | ortholog_one2one | 1 retrogene | |
| Erinaceus europaeus | ENSEEUG00000006428 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000000544 | ortholog_one2one | 7 retrogenes | |
| Homo sapiens | ENSG00000100216 | ortholog_one2one | 6 retrogenes | |
| Gorilla gorilla | ENSGGOG00000013230 | ortholog_one2one | 4 retrogenes | |
| Macropus eugenii | ENSMEUG00000002901 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000011792 | ortholog_one2one | 3 retrogenes | |
| Myotis lucifugus | ENSMLUG00000003761 | ortholog_one2many | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000000364 | ortholog_one2one | 8 retrogenes | |
| Mustela putorius furo | ENSMPUG00000013156 | ortholog_one2one | 2 retrogenes | |
| Mus musculus | ENSMUSG00000022427 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000015159 | ortholog_one2one | 6 retrogenes | |
| Otolemur garnettii | ENSOGAG00000029583 | ortholog_one2many | 9 retrogenes | |
| Pan troglodytes | ENSPTRG00000014374 | ortholog_one2one | 6 retrogenes | |
| Rattus norvegicus | ENSRNOG00000014058 | ortholog_one2one | 4 retrogenes | |
| Sus scrofa | ENSSSCG00000000097 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000015683 | ortholog_one2one | 4 retrogenes | |
| Vicugna pacos | ENSVPAG00000001485 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_563 | 79.21 | 69.72 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_782 | 71.53 | 95.77 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_pabe_1041 | 65.00 | 83.10 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_pabe_1088 | 66.67 | 83.10 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_pabe_1968 | 70.48 | 73.24 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_pabe_2489 | 59.76 | 57.04 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000011825 retrocopies