Parental gene: | TOMM22, ENSPTRG00000014374 |
| Aliases: | None |
| Description: | None |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 22:37356183..37359004(+) |
>ENSPTRG00000014374
ATGGCTGCCGCCGTCGCTGCTGCCGGTGCAGGGGAACCCCAGTCCCCGGACGAATTGCTCCCGAAAGGCGACGCGGAGAA
GCCTGAGGAGGAGCTGGAGGAGGACGACGATGAGGAGCTAGATGAGACCCTGTCGGAGAGACTATGGGGCCTGACGGAGA
TGTTTCCGGAGAGGGTCCGGTCCGCGGCCGGAGCCACTTTTGATCTTTCCCTCTTTGTGGCTCAGAAAATGTACAGGTTT
TCCAGGGCAGCCTTGTGGATTGGGACCACTTCCTTTATGATCCTGGTTCTTCCCGTTGTCTTTGAGACGGAGAAGTTGCA
AATGGAGCAACAGCAGCAACTGCAGCAGCGGCAGATACTTCTAGGACCTAACACAGGGCTCTCAGGAGGAATGCCAGGGG
CTCTACCCTCACTTCCTGGAAAGATCTAG
ATGGCTGCCGCCGTCGCTGCTGCCGGTGCAGGGGAACCCCAGTCCCCGGACGAATTGCTCCCGAAAGGCGACGCGGAGAA
GCCTGAGGAGGAGCTGGAGGAGGACGACGATGAGGAGCTAGATGAGACCCTGTCGGAGAGACTATGGGGCCTGACGGAGA
TGTTTCCGGAGAGGGTCCGGTCCGCGGCCGGAGCCACTTTTGATCTTTCCCTCTTTGTGGCTCAGAAAATGTACAGGTTT
TCCAGGGCAGCCTTGTGGATTGGGACCACTTCCTTTATGATCCTGGTTCTTCCCGTTGTCTTTGAGACGGAGAAGTTGCA
AATGGAGCAACAGCAGCAACTGCAGCAGCGGCAGATACTTCTAGGACCTAACACAGGGCTCTCAGGAGGAATGCCAGGGG
CTCTACCCTCACTTCCTGGAAAGATCTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 36 .50 RPM |
| SRP007412_cerebellum | 19 .39 RPM |
| SRP007412_heart | 22 .27 RPM |
| SRP007412_kidney | 30 .05 RPM |
| SRP007412_liver | 27 .17 RPM |
| SRP007412_testis | 54 .06 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000010692 | ortholog_one2many | 3 retrogenes | |
| Canis familiaris | ENSCAFG00000001383 | ortholog_one2many | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000011731 | ortholog_one2many | 5 retrogenes | |
| Cavia porcellus | ENSCPOG00000005963 | ortholog_one2one | 1 retrogene | |
| Equus caballus | ENSECAG00000010359 | ortholog_one2one | 1 retrogene | |
| Erinaceus europaeus | ENSEEUG00000006428 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000000544 | ortholog_one2one | 7 retrogenes | |
| Homo sapiens | ENSG00000100216 | ortholog_one2one | 6 retrogenes | |
| Gorilla gorilla | ENSGGOG00000013230 | ortholog_one2one | 4 retrogenes | |
| Macropus eugenii | ENSMEUG00000002901 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000011792 | ortholog_one2one | 3 retrogenes | |
| Myotis lucifugus | ENSMLUG00000003761 | ortholog_one2many | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000000364 | ortholog_one2one | 8 retrogenes | |
| Mustela putorius furo | ENSMPUG00000013156 | ortholog_one2one | 2 retrogenes | |
| Mus musculus | ENSMUSG00000022427 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000015159 | ortholog_one2one | 6 retrogenes | |
| Otolemur garnettii | ENSOGAG00000029583 | ortholog_one2many | 9 retrogenes | |
| Pongo abelii | ENSPPYG00000011825 | ortholog_one2one | 6 retrogenes | |
| Rattus norvegicus | ENSRNOG00000014058 | ortholog_one2one | 4 retrogenes | |
| Sus scrofa | ENSSSCG00000000097 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000015683 | ortholog_one2one | 4 retrogenes | |
| Vicugna pacos | ENSVPAG00000001485 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_461 | 76.71 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_627 | 81.75 | 95.77 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ptro_860 | 71.59 | 60.56 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_ptro_1583 | 70.48 | 73.24 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_ptro_2031 | 55.42 | 57.04 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_ptro_2117 | 55.68 | 59.15 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000014374 retrocopies