RetrogeneDB ID: | retro_chof_1977 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_441798:468..895(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | FAM204A | ||
Ensembl ID: | ENSCHOG00000010199 | ||
Aliases: | None | ||
Description: | family with sequence similarity 204, member A [Source:HGNC Symbol;Acc:25794] |
Percent Identity: | 90.34 % |
Parental protein coverage: | 67.14 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | GISLNMWNKFQELHK-KHSEQKNSAS-RFRRKKRKRSRKDKLNNGEASHSEHSPNEIQWKELTQYFGVNE |
GISLNMWNKFQELHK.KHSEQ.NSAS.RFRRKKRK.SRKDKLNNGE.SH.EHSPNEIQWKELTQYFGVNE | |
Retrocopy | GISLNMWNKFQELHK<KHSEQENSAS<RFRRKKRKHSRKDKLNNGETSHREHSPNEIQWKELTQYFGVNE |
Parental | RFDPPVKKKKIEKSGLEKSIDQAVEEWNIEKAEELSNQLATRELGVKIAKAVACHNFVKAKKAAENSQVV |
RFDPP......EKSGLEKSID.AVEEWNIEKAEELSNQLATRELGVKIAKAVACHNFVKAKKAAENSQVV | |
Retrocopy | RFDPPXXXXXXEKSGLEKSID*AVEEWNIEKAEELSNQLATRELGVKIAKAVACHNFVKAKKAAENSQVV |
Parental | RKKKK |
.KKKK | |
Retrocopy | QKKKK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |