RetrogeneDB ID: | retro_meug_606 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold14510:1615..2100(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | FAM204A | ||
Ensembl ID: | ENSMEUG00000002674 | ||
Aliases: | None | ||
Description: | family with sequence similarity 204, member A [Source:HGNC Symbol;Acc:25794] |
Percent Identity: | 63.69 % |
Parental protein coverage: | 69.83 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 3 |
Parental | CPSGVPQNMWNKFQELHKKRSEL-KTLTISTNKRSKGKRSRKGKLKSEEDSDSQQSSNEAQWKELT-QYF |
CPSG...NM..K.QEL....SEL.KTL.....K....K......LK.E..SDSQQSSN.AQWKELT.QYF | |
Retrocopy | CPSGLLLNMYIKLQELYXXXSEL<KTLN-NFYKQEGVKENVPEELKKE--SDSQQSSNKAQWKELT>QYF |
Parental | GINDKFEPLISNRA---SGLEVSIDKS-VAEGDIEKAEELSNRLATRELGVKIAKAVACRNFVKAKKDAE |
GINDK.EPL.S.RA...SGLE..I.KS..AEG.IEKAE.LS.RLAT.ELG.KI.KAVA..NFV.AKKDAE | |
Retrocopy | GINDKSEPLLSSRALLKSGLEMHINKS<LAEGGIEKAEDLSSRLATQELGAKIVKAVAWCNFVEAKKDAE |
Parental | TSQEARKKKKLAWGFEAKKRWETKSNMG |
TSQ...KKKKLA.G.E..K.WE.KSN.G | |
Retrocopy | TSQGL*KKKKLA*GLETNKSWESKSNVG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |