RetrogeneDB ID: | retro_chof_590 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_124657:4821..5245(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | FAM204A | ||
Ensembl ID: | ENSCHOG00000010199 | ||
Aliases: | None | ||
Description: | family with sequence similarity 204, member A [Source:HGNC Symbol;Acc:25794] |
Percent Identity: | 78.32 % |
Parental protein coverage: | 66.67 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | MWSGLLPPGLNESDVESNSEDEAIVENSGFNLQEDKEDQATRKSEISEFPTNGPKTETEANVNAYEECPS |
M.SGLLPPGLN...VESNS.DEA.VENSGFNLQEDKEDQA.RKSEIS.FPTNGPKTETE...NAYEECPS | |
Retrocopy | M*SGLLPPGLNSRNVESNSKDEATVENSGFNLQEDKEDQAIRKSEISDFPTNGPKTETEQMLNAYEECPS |
Parental | GISLNMWNKFQELHKKHSEQK-NSASRFRRKKRKRSRKDKLNNGEASHSEHSPNEIQWKELTQYFGVNER |
GISLNMWNK..ELH.KHSE.K.......R.K.RKRS.K.KLNNGEASH.EHSPNE.QWKE.TQYFG.N.R | |
Retrocopy | GISLNMWNKL*ELHTKHSERK>SASRLRRKK-RKRSQKEKLNNGEASHREHSPNETQWKEGTQYFGINDR |
Parental | FDP |
FDP | |
Retrocopy | FDP |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |