RetrogeneDB ID: | retro_ogar_1610 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873555.1:13249725..13250316(-) | ||
Located in intron of: | ENSOGAG00000009868 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | FAM204A | ||
Ensembl ID: | ENSOGAG00000028541 | ||
Aliases: | None | ||
Description: | family with sequence similarity 204, member A [Source:HGNC Symbol;Acc:25794] |
Percent Identity: | 66. % |
Parental protein coverage: | 84.98 % |
Number of stop codons detected: | 4 |
Number of frameshifts detected | 2 |
Parental | LLPPGLNESDIESNSEDEAPLEDSGLNLQENKEDGNIRKTETLDFPTDGSKTETEANVNAYEECPSGIP- |
LLPP.LN..D..SNSE...P.....LNLQE.KED..I.K.E..DF.TDGSKTE.EAN.NAYEECPSG.P. | |
Retrocopy | LLPPALNAGDPDSNSEHK-PR*RTQLNLQEDKEDRTISKIEISDFSTDGSKTEREANINAYEECPSGTP< |
Parental | LNVWNKFQELHKKHSEQKSSTSRFRRKKRKHSRKGKLKEEKETPSEQPANETHWKE-LTQYFGVNDRFEP |
LN.WN.FQELHKKHSEQKSSTSRFRR...................EQP..ET.W.E.LTQYFG.ND.FEP | |
Retrocopy | LNMWNRFQELHKKHSEQKSSTSRFRRXXXXXXXXXXXXXXXXXHTEQP*DETQWQE>LTQYFGINDGFEP |
Parental | PVKRKKVEKSGLEKRIDQAVEEWNIEKAEELSNQLATRELGVKIAKAVACHNFVKAKKEA |
.VK..KVEKSGLEKR.DQAVE..N..KA.E.SN.LAT.ELGVKIAKAVAC..F.KAKKEA | |
Retrocopy | TVKKRKVEKSGLEKRTDQAVEV*NTVKAKEFSN*LATQELGVKIAKAVACYHFTKAKKEA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |