RetrogeneDB ID: | retro_chof_2685 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_97099:5244..5883(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | FAM204A | ||
Ensembl ID: | ENSCHOG00000010199 | ||
Aliases: | None | ||
Description: | family with sequence similarity 204, member A [Source:HGNC Symbol;Acc:25794] |
Percent Identity: | 91.55 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | MWSGLLPPGLNESDVESNSEDEAIVENSGFNLQEDKEDQATRKSEISEFPTNGPKTETEANVNAYEECPS |
MWSGLLPPGLNESDVESNSEDEAIVENSGFNLQEDKE.QATRK.EI.EFPTNGPKTETEANVNAYEECPS | |
Retrocopy | MWSGLLPPGLNESDVESNSEDEAIVENSGFNLQEDKEYQATRKLEILEFPTNGPKTETEANVNAYEECPS |
Parental | GISLNMWNKFQELHKKHSEQKNSASRFRRKKRKRSRKDKLNNGEASHSEHSPNEIQWKELTQYFGVNERF |
GISLNMWNKFQELHKKHSEQ.NSASRFRRKKRK..RKDKLNNGE.S.SEHSPNEIQWKELTQYFGVNERF | |
Retrocopy | GISLNMWNKFQELHKKHSEQENSASRFRRKKRKHCRKDKLNNGETSQSEHSPNEIQWKELTQYFGVNERF |
Parental | DPPVKKKKIEKSGLEKSIDQAVEEWNIEKAEELSNQLATRELGVKIAKAVACHNFVKAKKAAENSQVVRK |
DPP......EKSGLEKSID.AVEEWNIEKAEELSN.LATRELGVKIAKAVACHNFVK.KKAAENSQVV.K | |
Retrocopy | DPPXXXXXXEKSGLEKSID*AVEEWNIEKAEELSNHLATRELGVKIAKAVACHNFVKTKKAAENSQVVQK |
Parental | KKK |
KKK | |
Retrocopy | KKK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |