RetrogeneDB ID: | retro_itri_1185 | ||
Retrocopylocation | Organism: | Squirrel (Ictidomys tridecemlineatus) | |
Coordinates: | JH393395.1:709932..710286(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSSTOG00000010980 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 75. % |
Parental protein coverage: | 90.7 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | AAQGLRACGPNGVAAVRSMSSRGGIPT-DDEQA-TGLEREVLMAAKKGLDPYNILAPKAASGTKEDPNLV |
A.Q.LRACGPNGV....SM.S.GGIPT.D.....TGL.REVLMAAKK.LDPYN.L..K.ASGTKEDPNLV | |
Retrocopy | ATQALRACGPNGVVPSISMASQGGIPTDDEQAT>TGLDREVLMAAKKNLDPYNTLPSKTASGTKEDPNLV |
Parental | PSITNKRIVGCICEEDNSAVIW-FWLHKGETQRCPNCGTHYKLVPHQFAH |
PSITNK.IVGCIC.ED.SAVIW..WLHKG..Q..PNCGTHYKLVPHQFA. | |
Retrocopy | PSITNKGIVGCICAEDKSAVIW<VWLHKGDSQQSPNCGTHYKLVPHQFAY |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |