RetrogeneDB ID: | retro_tsyr_1829 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_61041:7341..7836(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RAP1A | ||
Ensembl ID: | ENSTSYG00000004521 | ||
Aliases: | None | ||
Description: | RAP1A, member of RAS oncogene family [Source:HGNC Symbol;Acc:9855] |
Percent Identity: | 93.94 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | TVQFVQGIFVEKYDPTIEDSYRKQVEVDCQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQST |
TVQFVQGIFVEKYDPTIEDSYRKQVEVD.QQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQST | |
Retrocopy | TVQFVQGIFVEKYDPTIEDSYRKQVEVDAQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQST |
Parental | FNDLQDLREQILRVKDTEDVPMILVGNKCDLEDERVVGKEQGQNLARQWCSCAFLESSAKSKINVNEIFY |
FNDLQDLREQILRVKDT.DVPMILVGNKCDLEDERVVGKEQGQNLARQW..CAFLESSAKSKINVNEIFY | |
Retrocopy | FNDLQDLREQILRVKDTDDVPMILVGNKCDLEDERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFY |
Parental | DLVRQINRKTPVEKKKPKKKSCLLL |
DLVRQINRKTPV..K..KK.SC.LL | |
Retrocopy | DLVRQINRKTPVPGKARKKSSCQLL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |