Parental gene: | HIGD1A, ENSCHOG00000009079 |
| Aliases: | None |
| Description: | HIG1 hypoxia inducible domain family, member 1A [Source:HGNC Symbol;Acc:29527] |
| Organism: | Sloth (Choloepus hoffmanni) |
| Coordinates: | GeneScaffold_6865:4991..7717(-) |
>ENSCHOG00000009079
TCAACCGATACAGATGTTTCTCTGTCTTCATATGATGAAGATCAGGGATCTAAACTTATCCGAAAAGCTAAAGAGGCACC
ATTTGTCCCGATTGGGATGGCAGGTTTTGCAGCAATTGTTGCATATGGATTATACAAATTGAAGAGCAGGGGAAATACTA
AAATGTCTGTTCACCTGATTCACATGCGTGTGGCAGCCCAAGGCTTTGTTGTGGGAGCAATGACTCTTGGTATGGGCTAT
TCCTTGTATCGGGAATACTGGGCAAAACCTAAACTTTAG
TCAACCGATACAGATGTTTCTCTGTCTTCATATGATGAAGATCAGGGATCTAAACTTATCCGAAAAGCTAAAGAGGCACC
ATTTGTCCCGATTGGGATGGCAGGTTTTGCAGCAATTGTTGCATATGGATTATACAAATTGAAGAGCAGGGGAAATACTA
AAATGTCTGTTCACCTGATTCACATGCGTGTGGCAGCCCAAGGCTTTGTTGTGGGAGCAATGACTCTTGGTATGGGCTAT
TCCTTGTATCGGGAATACTGGGCAAAACCTAAACTTTAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000012431 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000032668 | ortholog_one2many | 9 retrogenes | |
| Cavia porcellus | ENSCPOG00000000703 | ortholog_one2one | 11 retrogenes | |
| Equus caballus | ENSECAG00000010978 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000007493 | ortholog_one2one | 4 retrogenes | |
| Felis catus | ENSFCAG00000000537 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000181061 | ortholog_one2one | 13 retrogenes | |
| Gorilla gorilla | ENSGGOG00000016759 | ortholog_one2many | 3 retrogenes | |
| Macaca mulatta | ENSMMUG00000018783 | ortholog_one2one | 11 retrogenes | |
| Monodelphis domestica | ENSMODG00000013605 | ortholog_one2many | 6 retrogenes | |
| Mustela putorius furo | ENSMPUG00000011870 | ortholog_one2one | 3 retrogenes | |
| Mus musculus | ENSMUSG00000038412 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000011358 | ortholog_one2one | 3 retrogenes | |
| Ochotona princeps | ENSOPRG00000016072 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000013974 | ortholog_one2one | 16 retrogenes | |
| Pan troglodytes | ENSPTRG00000014802 | ortholog_one2many | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000019428 | ortholog_one2many | 1 retrogene | |
| Sus scrofa | ENSSSCG00000011290 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000009681 | ortholog_one2one | 3 retrogenes | |
| Tupaia belangeri | ENSTBEG00000002324 | ortholog_one2one | 5 retrogenes | |
| Tursiops truncatus | ENSTTRG00000009760 | ortholog_one2one | 8 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_chof_81 | 90.22 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_chof_171 | 94.57 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_chof_180 | 87.06 | 91.30 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_chof_495 | 92.39 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_chof_546 | 97.83 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_chof_1067 | 90.22 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_chof_1609 | 100.00 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_chof_1978 | 100.00 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_chof_2028 | 98.91 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 10. | retro_chof_2253 | 84.62 | 98.91 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCHOG00000009079 retrocopies