Parental gene:

Rpl31, ENSDORG00000015728

Aliases:None
Description:ribosomal protein L31 [Source:MGI Symbol;Acc:MGI:2149632]
Organism:Kangaroo rat (Dipodomys ordii)
Coordinates:GeneScaffold_5253:107476..111941(+)


>ENSDORG00000015728
ATGGCTCCCGCAAAGAAGGGTGGTGAGAAGAAAAAGGGCCGTTCTGCCATCAACGAGGTGGTGACCCGTGAATACACCAT
CAACATTCACAAGCGCATCCATGGAGTGGGCTTTAAGAAGCGCGCTCCTCGTGCACTGAAAGAGATCCGGAAGTTTGCCA
TGAAGGAGATGGGGACTCCAGATGTGCGCATTGATACCAGGCTCAACAAAGCTGTCTGGGCCAAAGGAATAAGGAATGTC
CCCTACCGGATCCGCGTGCGGCTATCTAGAAAACGGAATGAGGATGAAGACTCCCCAAACAAGCTCTATACTCTGGTAAC
CTATGTCCCTGTTACCACATTCAAAAATCTACAGACAGTCAATGTGGATGAGAATTAG

Species Parental gene accession Homology type Retrogenes number
Felis catus ENSFCAG00000026430 ortholog_one2one 13 retrogenes
retro_fcat_1420, retro_fcat_148, retro_fcat_17, retro_fcat_190, retro_fcat_1957, retro_fcat_2003, retro_fcat_251, retro_fcat_46, retro_fcat_466, retro_fcat_658, retro_fcat_725, retro_fcat_803, retro_fcat_881,
Latimeria chalumnae ENSLACG00000013603 ortholog_one2one 1 retrogene
retro_lcha_94,
Macropus eugenii ENSMEUG00000000963 ortholog_one2one 8 retrogenes
retro_meug_1083, retro_meug_1433, retro_meug_1731, retro_meug_1741, retro_meug_198, retro_meug_418, retro_meug_588, retro_meug_649,
Myotis lucifugus ENSMLUG00000002507 possible_ortholog 21 retrogenes
retro_mluc_1072, retro_mluc_1135, retro_mluc_1239, retro_mluc_1301, retro_mluc_1406, retro_mluc_1470, retro_mluc_1666, retro_mluc_1678, retro_mluc_1896, retro_mluc_1913, retro_mluc_2028, retro_mluc_2124, retro_mluc_2126, retro_mluc_269, retro_mluc_303, retro_mluc_463, retro_mluc_767, retro_mluc_782, retro_mluc_914, retro_mluc_922, retro_mluc_997,
Otolemur garnettii ENSOGAG00000014494 possible_ortholog 10 retrogenes
retro_ogar_103, retro_ogar_143, retro_ogar_150, retro_ogar_178, retro_ogar_181, retro_ogar_186, retro_ogar_262, retro_ogar_271, retro_ogar_29, retro_ogar_3,
Procavia capensis ENSPCAG00000004787 ortholog_one2one 10 retrogenes
retro_pcap_121, retro_pcap_125, retro_pcap_152, retro_pcap_228, retro_pcap_230, retro_pcap_266, retro_pcap_33, retro_pcap_378, retro_pcap_401, retro_pcap_413,
Pongo abelii ENSPPYG00000025870 possible_ortholog 4 retrogenes
retro_pabe_106, retro_pabe_1635, retro_pabe_168, retro_pabe_895,
Rattus norvegicus ENSRNOG00000013508 ortholog_one2one 8 retrogenes
retro_rnor_101, retro_rnor_152, retro_rnor_1809, retro_rnor_217, retro_rnor_22, retro_rnor_267, retro_rnor_277, retro_rnor_286,
Sus scrofa ENSSSCG00000008170 possible_ortholog 4 retrogenes
retro_sscr_1072, retro_sscr_1073, retro_sscr_128, retro_sscr_263,
Sus scrofa ENSSSCG00000025180 possible_ortholog 6 retrogenes
retro_sscr_20, retro_sscr_34, retro_sscr_469, retro_sscr_501, retro_sscr_713, retro_sscr_81,
Tursiops truncatus ENSTTRG00000016447 ortholog_one2one 24 retrogenes
retro_ttru_1054, retro_ttru_1072, retro_ttru_1102, retro_ttru_1470, retro_ttru_1717, retro_ttru_215, retro_ttru_230, retro_ttru_262, retro_ttru_281, retro_ttru_316, retro_ttru_40, retro_ttru_482, retro_ttru_507, retro_ttru_527, retro_ttru_67, retro_ttru_671, retro_ttru_690, retro_ttru_785, retro_ttru_80, retro_ttru_804, retro_ttru_842, retro_ttru_886, retro_ttru_896, retro_ttru_99,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dord_164 67.83 91.20
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2. retro_dord_515 87.50 95.20
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3. retro_dord_770 62.37 72.80
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Download FASTA sequences of all ENSDORG00000015728 retrocopies