Parental gene:

RPL31, ENSTTRG00000016447

Aliases:None
Description:ribosomal protein L31 [Source:HGNC Symbol;Acc:10334]
Organism:Dolphin (Tursiops truncatus)
Coordinates:GeneScaffold_2648:112509..117248(+)


>ENSTTRG00000016447
ATGGCTCCCGCAAAGAAGGGCGGCGAGAAGAAGAAGGGCCGGTCCGCCATCAACGAGGTGGTGACCAGAGAATACACCAT
CAACATTCACAAGCGCATCCACGGAGTGGGTTTCAAGAAGCGTGCCCCTCGGGCACTCAAAGAAATACGGAAATTTGCCA
TGAAGGAGATGGGAACCCCGGATGTACGCATTGACACCAGGCTCAACAAAGCTGTCTGGGCCAAAGGAATAAGGAATGTC
CCATACCGTATCCGTGTGCGGTTGTCCAGAAAACGGAACGAAGATGAAGATTCACCAAACAAGCTCTATACGTTGGTTAC
CTATGTACCTGTCACCACTTTCAAAAATCTACAGACAGTTAATGTGGATGAGAACTAA

Species Parental gene accession Homology type Retrogenes number
Dipodomys ordii ENSDORG00000015728 ortholog_one2one 3 retrogenes
retro_dord_164, retro_dord_515, retro_dord_770,
Felis catus ENSFCAG00000026430 ortholog_one2one 13 retrogenes
retro_fcat_1420, retro_fcat_148, retro_fcat_17, retro_fcat_190, retro_fcat_1957, retro_fcat_2003, retro_fcat_251, retro_fcat_46, retro_fcat_466, retro_fcat_658, retro_fcat_725, retro_fcat_803, retro_fcat_881,
Latimeria chalumnae ENSLACG00000013603 ortholog_one2one 1 retrogene
retro_lcha_94,
Macropus eugenii ENSMEUG00000000963 ortholog_one2one 8 retrogenes
retro_meug_1083, retro_meug_1433, retro_meug_1731, retro_meug_1741, retro_meug_198, retro_meug_418, retro_meug_588, retro_meug_649,
Myotis lucifugus ENSMLUG00000002507 possible_ortholog 21 retrogenes
retro_mluc_1072, retro_mluc_1135, retro_mluc_1239, retro_mluc_1301, retro_mluc_1406, retro_mluc_1470, retro_mluc_1666, retro_mluc_1678, retro_mluc_1896, retro_mluc_1913, retro_mluc_2028, retro_mluc_2124, retro_mluc_2126, retro_mluc_269, retro_mluc_303, retro_mluc_463, retro_mluc_767, retro_mluc_782, retro_mluc_914, retro_mluc_922, retro_mluc_997,
Otolemur garnettii ENSOGAG00000014494 possible_ortholog 10 retrogenes
retro_ogar_103, retro_ogar_143, retro_ogar_150, retro_ogar_178, retro_ogar_181, retro_ogar_186, retro_ogar_262, retro_ogar_271, retro_ogar_29, retro_ogar_3,
Procavia capensis ENSPCAG00000004787 ortholog_one2one 10 retrogenes
retro_pcap_121, retro_pcap_125, retro_pcap_152, retro_pcap_228, retro_pcap_230, retro_pcap_266, retro_pcap_33, retro_pcap_378, retro_pcap_401, retro_pcap_413,
Pongo abelii ENSPPYG00000025870 possible_ortholog 4 retrogenes
retro_pabe_106, retro_pabe_1635, retro_pabe_168, retro_pabe_895,
Rattus norvegicus ENSRNOG00000013508 ortholog_one2one 8 retrogenes
retro_rnor_101, retro_rnor_152, retro_rnor_1809, retro_rnor_217, retro_rnor_22, retro_rnor_267, retro_rnor_277, retro_rnor_286,
Sus scrofa ENSSSCG00000008170 possible_ortholog 4 retrogenes
retro_sscr_1072, retro_sscr_1073, retro_sscr_128, retro_sscr_263,
Sus scrofa ENSSSCG00000025180 possible_ortholog 6 retrogenes
retro_sscr_20, retro_sscr_34, retro_sscr_469, retro_sscr_501, retro_sscr_713, retro_sscr_81,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ttru_40 63.49 100.00
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2. retro_ttru_67 73.21 88.00
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3. retro_ttru_80 89.60 100.00
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4. retro_ttru_99 65.62 100.00
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5. retro_ttru_215 75.22 88.80
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6. retro_ttru_230 88.19 100.00
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7. retro_ttru_262 72.95 96.80
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8. retro_ttru_281 76.19 100.00
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9. retro_ttru_316 86.40 100.00
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10. retro_ttru_482 66.67 69.60
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11. retro_ttru_507 84.00 100.00
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12. retro_ttru_527 75.59 100.00
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13. retro_ttru_671 81.75 100.00
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14. retro_ttru_690 82.68 100.00
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15. retro_ttru_785 77.31 94.40
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16. retro_ttru_804 73.55 95.20
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17. retro_ttru_842 54.05 88.80
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18. retro_ttru_886 71.19 93.60
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19. retro_ttru_896 78.57 100.00
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20. retro_ttru_1054 83.20 100.00
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21. retro_ttru_1072 74.74 75.20
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22. retro_ttru_1102 77.50 96.00
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23. retro_ttru_1470 59.02 96.80
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24. retro_ttru_1717 92.80 100.00
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Download FASTA sequences of all ENSTTRG00000016447 retrocopies