RetrogeneDB ID: | retro_ttru_1717 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | scaffold_87915:20465..20840(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTTRG00000016447 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 92.8 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | MAPAKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNK |
MAPAKKGG.KKKGRSAINEVVTREYTINIHKRI.GVGFKKRAPRALK.I.KFAMKEMGTPDV.IDTR.NK | |
Retrocopy | MAPAKKGGRKKKGRSAINEVVTREYTINIHKRIRGVGFKKRAPRALKKIWKFAMKEMGTPDVCIDTRFNK |
Parental | AVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVDEN |
AV.AKGIRNVP.RIRVRLSRKRNEDEDSPNKL.TLVTYVPVTTFKNLQTVNVDEN | |
Retrocopy | AV*AKGIRNVP*RIRVRLSRKRNEDEDSPNKLCTLVTYVPVTTFKNLQTVNVDEN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |