Parental gene:

ENSFCAG00000001762

Aliases:None
Description:None
Organism:Cat (Felis catus)
Coordinates:A2:20228554..20230399(-)


>ENSFCAG00000001762
ATGGCCAAGTCCAAGAACCACACCACGCACAACCAGTCACGGAAATGGCACAGAAATGGCATCAAGAAGCCCCGGTCACA
AAGATACGAATCTCTTAAGGGGGTAGACCCCAAGTTCCTGAGGAACATGCGCTTTGCCAAGAAGCACAACAAGAAGGGCC
TGAAGAAGATGCAGGCCAACAACGCCAAGGCCATGAGTGCACGTGCCGAGGCTATCAAGGCCCTTGTCAAGCCCAAGGAG
GTCAAGCCCAAGATCCCAAAGGGTGGCAGCCGCAAGCTCAATCGACTTGCTTACATCGCTCACCCCAAGCTCGGGAAACG
TGCTCGTGCCCGCATTGCCAAGGGTCTCAGGCTCTGCCGGCCAAAGGCCAAGGCCAAGGCTCAAACCAAGGCCCAGCCTG
CAGCTGCAACTCCTGCTCCAGCTCCTGCTGCAGCTCAGGCTCAGGCTCCCAAAGGTGCCCAGGCCCCCACAAAGGCACCA
GTGTAG

Library Parental gene expression (RPM)
SRP017611_liver 156 .99 RPM
SRP017611_kidney 325 .66 RPM
SRP017611_brain 68 .86 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000009163 possible_ortholog 6 retrogenes
Bos taurus ENSBTAG00000018628 possible_ortholog 1 retrogene
Callithrix jacchus ENSCJAG00000005951 possible_ortholog 9 retrogenes
Cavia porcellus ENSCPOG00000011738 possible_ortholog 1 retrogene
Dasypus novemcinctus ENSDNOG00000000209 ortholog_one2one 7 retrogenes
Equus caballus ENSECAG00000007397 ortholog_one2one 2 retrogenes
Homo sapiens ENSG00000162244 possible_ortholog 23 retrogenes
Gorilla gorilla ENSGGOG00000024691 possible_ortholog 16 retrogenes
Loxodonta africana ENSLAFG00000005757 possible_ortholog 5 retrogenes
Microcebus murinus ENSMICG00000002705 ortholog_one2one 9 retrogenes
Myotis lucifugus ENSMLUG00000015088 possible_ortholog 14 retrogenes
Macaca mulatta ENSMMUG00000019248 possible_ortholog 2 retrogenes
Monodelphis domestica ENSMODG00000028750 ortholog_many2many 17 retrogenes
Mustela putorius furo ENSMPUG00000011734 ortholog_one2many 6 retrogenes
Mus musculus ENSMUSG00000048758 possible_ortholog 3 retrogenes
Otolemur garnettii ENSOGAG00000013766 ortholog_one2many 2 retrogenes
Ochotona princeps ENSOPRG00000008821 possible_ortholog 10 retrogenes
Procavia capensis ENSPCAG00000009712 possible_ortholog 4 retrogenes
Pongo abelii ENSPPYG00000013818 possible_ortholog 21 retrogenes
Rattus norvegicus ENSRNOG00000011138 possible_ortholog 15 retrogenes
Sorex araneus ENSSARG00000013572 possible_ortholog 8 retrogenes
Sarcophilus harrisii ENSSHAG00000006854 ortholog_one2many 2 retrogenes
Sus scrofa ENSSSCG00000027573 possible_ortholog 7 retrogenes
Ictidomys tridecemlineatus ENSSTOG00000020488 possible_ortholog 14 retrogenes
Tursiops truncatus ENSTTRG00000003514 possible_ortholog 5 retrogenes
Vicugna pacos ENSVPAG00000001282 possible_ortholog 29 retrogenes

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_249 59.46 90.68
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_fcat_485 64.83 90.06
Please wait, loading
Please wait, loading
Please wait, loading
3. retro_fcat_687 66.91 83.85
Please wait, loading
Please wait, loading
Please wait, loading
4. retro_fcat_952 68.59 95.65
Please wait, loading
Please wait, loading
Please wait, loading
5. retro_fcat_1032 58.74 88.20
Please wait, loading
Please wait, loading
Please wait, loading
6. retro_fcat_1132 64.14 88.20
Please wait, loading
Please wait, loading
Please wait, loading
7. retro_fcat_1753 66.43 86.96
Please wait, loading
Please wait, loading
Please wait, loading
8. retro_fcat_1774 67.07 50.93
Please wait, loading
Please wait, loading
Please wait, loading
9. retro_fcat_1897 66.67 50.93
Please wait, loading
Please wait, loading
Please wait, loading

Download FASTA sequences of all ENSFCAG00000001762 retrocopies